RNA–Protein interactions for RNA: ENSMUST00000174592.7

Ccdc28a-205, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 5 BASIC

Gene Ccdc28a, Length 882 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-205ENSMUST00000174592 Miga2Q8BK03 593 aa12.62□□□□□ -0.39
Ccdc28a-205ENSMUST00000174592 Slc5a1Q8C3K6 665 aa12.62□□□□□ -0.39
Ccdc28a-205ENSMUST00000174592 XpcP51612 930 aa12.61□□□□□ -0.39
Ccdc28a-205ENSMUST00000174592 Wdhd1P59328 1117 aa12.61□□□□□ -0.39
Ccdc28a-205ENSMUST00000174592 Micall1Q8BGT6 870 aa12.61□□□□□ -0.39
Ccdc28a-205ENSMUST00000174592 IarsQ8BU30 1262 aa12.61□□□□□ -0.39
Ccdc28a-205ENSMUST00000174592 DaglaQ6WQJ1 1044 aa12.6□□□□□ -0.39
Ccdc28a-205ENSMUST00000174592 NpcdF8VQB8 469 aa12.59□□□□□ -0.39
Ccdc28a-205ENSMUST00000174592 Klrk1O54709 232 aa12.59□□□□□ -0.39
Ccdc28a-205ENSMUST00000174592 Amhr2Q8K592 568 aa12.59□□□□□ -0.39
Ccdc28a-205ENSMUST00000174592 Cdca7Q9D0M2 382 aa12.59□□□□□ -0.39
Ccdc28a-205ENSMUST00000174592 Crb1Q8VHS2 1405 aa12.59□□□□□ -0.39
Ccdc28a-205ENSMUST00000174592 Lama2Q60675 3118 aaKnown RBP12.59□□□□□ -0.39
Ccdc28a-205ENSMUST00000174592 Ubr3Q5U430 1889 aa12.58□□□□□ -0.4
Ccdc28a-205ENSMUST00000174592 Atg3Q9CPX6 314 aa12.58□□□□□ -0.4
Ccdc28a-205ENSMUST00000174592 PalmQ9Z0P4 383 aa12.58□□□□□ -0.4
Ccdc28a-205ENSMUST00000174592 Golgb1E9PVZ8 3238 aa12.58□□□□□ -0.4
Ccdc28a-205ENSMUST00000174592 Col11a2Q64739 1736 aa12.57□□□□□ -0.4
Ccdc28a-205ENSMUST00000174592 Kdm6aO70546 1401 aa12.57□□□□□ -0.4
Ccdc28a-205ENSMUST00000174592 PrimpolQ6P1E7 537 aa12.57□□□□□ -0.4
Ccdc28a-205ENSMUST00000174592 Dcaf5Q80T85 946 aa12.57□□□□□ -0.4
Ccdc28a-205ENSMUST00000174592 Gjd4Q8BSD4 364 aa12.57□□□□□ -0.4
Ccdc28a-205ENSMUST00000174592 Stk32bQ9JJX8 414 aa12.57□□□□□ -0.4
Ccdc28a-205ENSMUST00000174592 D830030K20RikE9PYQ5 218 aa12.55□□□□□ -0.4
Ccdc28a-205ENSMUST00000174592 Gm3043K7N693 218 aa12.55□□□□□ -0.4
Ccdc28a-205ENSMUST00000174592 Gm16440K7N6G6 218 aa12.55□□□□□ -0.4
Ccdc28a-205ENSMUST00000174592 Gm2244L7N2A3 218 aa12.55□□□□□ -0.4
Ccdc28a-205ENSMUST00000174592 Gm3278L7N2D2 218 aa12.55□□□□□ -0.4
Ccdc28a-205ENSMUST00000174592 Gm8271L7N2E2 218 aa12.55□□□□□ -0.4
Ccdc28a-205ENSMUST00000174592 Hoxb7P09024 217 aa12.55□□□□□ -0.4
Ccdc28a-205ENSMUST00000174592 Lmnb1P14733 588 aaKnown RBP12.55□□□□□ -0.4
Ccdc28a-205ENSMUST00000174592 EgfrQ01279 1210 aa12.55□□□□□ -0.4
Ccdc28a-205ENSMUST00000174592 Atf5O70191 283 aa12.54□□□□□ -0.4
Ccdc28a-205ENSMUST00000174592 Lrrc43Q3V0L5 667 aa12.54□□□□□ -0.4
Ccdc28a-205ENSMUST00000174592 Ints5Q8CHT3 1018 aa12.54□□□□□ -0.4
Ccdc28a-205ENSMUST00000174592 Ppp1r3fQ9JIG4 799 aa12.54□□□□□ -0.4
Ccdc28a-205ENSMUST00000174592 Zfyve9A2A8R0 1397 aa12.54□□□□□ -0.4
Ccdc28a-205ENSMUST00000174592 Fstl1Q62356 306 aa12.53□□□□□ -0.4
Ccdc28a-205ENSMUST00000174592 Asic4Q7TNS7 539 aa12.53□□□□□ -0.4
Ccdc28a-205ENSMUST00000174592 Spire2Q8K1S6 718 aa12.53□□□□□ -0.4
Ccdc28a-205ENSMUST00000174592 Ciapin1Q8WTY4 309 aa12.53□□□□□ -0.4
Ccdc28a-205ENSMUST00000174592 Sos1Q62245 1319 aa12.53□□□□□ -0.4
Ccdc28a-205ENSMUST00000174592 Trpm3Q5F4S9 1721 aa12.53□□□□□ -0.4
Ccdc28a-205ENSMUST00000174592 C4bP01029 1738 aa12.52□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 CfhP06909 1234 aa12.52□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 Eya1P97767 591 aa12.52□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 Tango6Q8C3S2 1079 aa12.52□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 HmcesQ8R1M0 353 aaKnown RBP12.52□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 Togaram1Q6A070 1776 aaKnown RBP12.51□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 Q8C6G1 249 aa12.51□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 Cap2Q9CYT6 476 aa12.51□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 Phkg2Q9DB30 406 aa12.51□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 VegfbP49766 207 aa12.5□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 Smg7Q5RJH6 1138 aaKnown RBP12.5□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 Rbm26Q6NZN0 1012 aaKnown RBP12.5□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 Nop58Q6DFW4 536 aaKnown RBP12.49□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 Unc5clQ6R653 518 aa12.49□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 Rasgrp4Q8BTM9 673 aa12.49□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 Chmp7Q8R1T1 451 aa12.49□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 Ric1Q69ZJ7 1422 aa12.48□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 Adcy9P51830 1353 aa12.48□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 Srp68Q8BMA6 625 aaKnown RBP12.48□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 Ptcd1Q8C2E4 695 aaKnown RBP12.48□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 Cd248Q91V98 765 aa12.48□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 Ssfa2Q922B9 1252 aa12.48□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 Slurp2P0DP59 97 aa12.47□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 DiexfQ8BTT6 772 aaKnown RBP12.47□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 PdgfdQ925I7 370 aa12.47□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 Pdzd9Q9D9M4 266 aa12.47□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 Plagl1Q9JLQ4 704 aa12.47□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 Parp14Q2EMV9 1817 aa12.46□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 IbtkQ6ZPR6 1352 aaKnown RBP12.46□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 Setdb1O88974 1307 aa12.46□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 Usp34Q6ZQ93 3582 aa12.46□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 Slc4a9E9PUP3 929 aa12.46□□□□□ -0.41
Ccdc28a-205ENSMUST00000174592 Frmpd3A0A140LIW3 1774 aa12.46□□□□□ -0.42
Ccdc28a-205ENSMUST00000174592 Tjp1P39447 1745 aaKnown RBP12.45□□□□□ -0.42
Ccdc28a-205ENSMUST00000174592 StrcQ8VIM6 1809 aa12.44□□□□□ -0.42
Ccdc28a-205ENSMUST00000174592 Slc4a1apE9PX68 744 aa12.44□□□□□ -0.42
Ccdc28a-205ENSMUST00000174592 Atp1b3P97370 278 aa12.44□□□□□ -0.42
Ccdc28a-205ENSMUST00000174592 Usp48Q3V0C5 1052 aa12.44□□□□□ -0.42
Ccdc28a-205ENSMUST00000174592 Znf428Q8C1M2 176 aa12.44□□□□□ -0.42
Ccdc28a-205ENSMUST00000174592 Col4a5Q63ZW6 1691 aa12.43□□□□□ -0.42
Ccdc28a-205ENSMUST00000174592 Prdm11A2AGX3 565 aa12.43□□□□□ -0.42
Ccdc28a-205ENSMUST00000174592 Eif4a2P10630 407 aa12.43□□□□□ -0.42
Ccdc28a-205ENSMUST00000174592 Pde4dQ01063 747 aa12.43□□□□□ -0.42
Ccdc28a-205ENSMUST00000174592 Thrap3Q569Z6 951 aaKnown RBP12.43□□□□□ -0.42
Ccdc28a-205ENSMUST00000174592 Pdzph1Q8BGR1 1238 aa12.43□□□□□ -0.42
Ccdc28a-205ENSMUST00000174592 Col24a1Q30D77 1733 aa12.42□□□□□ -0.42
Ccdc28a-205ENSMUST00000174592 PnisrA2AJT4 805 aaKnown RBP12.42□□□□□ -0.42
Ccdc28a-205ENSMUST00000174592 Magea8O89012 320 aa12.42□□□□□ -0.42
Ccdc28a-205ENSMUST00000174592 Gsdma3Q5Y4Y6 464 aa12.42□□□□□ -0.42
Ccdc28a-205ENSMUST00000174592 Slfnl1Q8BHW9 410 aa12.42□□□□□ -0.42
Ccdc28a-205ENSMUST00000174592 Slc24a1Q91WD8 1130 aa12.42□□□□□ -0.42
Ccdc28a-205ENSMUST00000174592 Tspoap1Q7TNF8 1846 aa12.41□□□□□ -0.42
Ccdc28a-205ENSMUST00000174592 Larp1bA0A0A6YXJ7 370 aaKnown RBP12.41□□□□□ -0.42
Ccdc28a-205ENSMUST00000174592 Ppargc1bQ8VHJ7 1014 aa12.41□□□□□ -0.42
Ccdc28a-205ENSMUST00000174592 Tktl2Q9D4D4 627 aa12.41□□□□□ -0.42
Ccdc28a-205ENSMUST00000174592 Ubn2Q80WC1 1314 aa12.39□□□□□ -0.43
Ccdc28a-205ENSMUST00000174592 MpripP97434 1024 aa12.39□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms