RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 VgfQ0VGU4 617 aa16.2■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Jmjd4Q8BFT6 427 aa16.2■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Cep170bQ80U49 1574 aa16.2■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Cavin2Q63918 418 aaKnown RBP16.19■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Ppip5k2Q6ZQB6 1129 aa16.19■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Ppm1fQ8CGA0 452 aa16.19■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Klc3Q91W40 508 aa16.19■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Lmbr1lQ9D1E5 489 aa16.19■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Vgll3P85442 326 aa16.19■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Nlrp3Q8R4B8 1033 aa16.19■□□□□ 0.18
Clcn3-204ENSMUST00000110301 NgdnQ9DB96 315 aaKnown RBP16.19■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Taf7Q9R1C0 341 aa16.19■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Mapk8ip1Q9WVI9 707 aa16.19■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Hecw2Q6I6G8 1578 aa16.19■□□□□ 0.18
Clcn3-204ENSMUST00000110301 VeztQ3ZK22 780 aa16.18■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Rnf20Q5DTM8 973 aa16.18■□□□□ 0.18
Clcn3-204ENSMUST00000110301 CrcpO35427 148 aa16.18■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Myd88P22366 296 aa16.18■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Brf1Q8CFK2 676 aa16.18■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Hs1bp3Q3TC93 395 aa16.17■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Wdr63B2RY71 923 aa16.17■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Qtrt2B8ZXI1 415 aa16.17■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Dhx16G3X8X0 1044 aaKnown RBP16.17■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Cadps2Q8BYR5 1297 aa16.17■□□□□ 0.18
Clcn3-204ENSMUST00000110301 KinQ8K339 391 aa16.17■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Dnttip2Q8R2M2 758 aaKnown RBP16.17■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Nip7Q9CXK8 180 aaKnown RBP16.17■□□□□ 0.18
Clcn3-204ENSMUST00000110301 CltcQ68FD5 1675 aaKnown RBP16.17■□□□□ 0.18
Clcn3-204ENSMUST00000110301 FosbP13346 338 aa16.17■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Ncoa4Q5U4H9 625 aa16.17■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Card10P58660 1021 aa16.16■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Pik3r4Q8VD65 1358 aa16.16■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Tbc1d9Q3UYK3 1264 aa16.16■□□□□ 0.18
Clcn3-204ENSMUST00000110301 PogkQ80TC5 607 aa16.16■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Sptbn5F6UCX4 1208 aa16.16■□□□□ 0.18
Clcn3-204ENSMUST00000110301 PhaxQ9JJT9 385 aaKnown RBP16.16■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Akap12Q9WTQ5 1684 aa16.16■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Pa2g4P50580 394 aaKnown RBP16.15■□□□□ 0.18
Clcn3-204ENSMUST00000110301 CalcaP70160 136 aa16.15■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Noc3lQ8VI84 807 aaKnown RBP16.15■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Ankle2Q6P1H6 964 aa16.15■□□□□ 0.18
Clcn3-204ENSMUST00000110301 GptQ8QZR5 496 aa16.15■□□□□ 0.18
Clcn3-204ENSMUST00000110301 PnnO35691 725 aaKnown RBP16.15■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Phkg2Q9DB30 406 aa16.15■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Trim34bJ3QNR8 485 aa16.14■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Ddx58Q6Q899 926 aa16.14■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Tns3Q5SSZ5 1440 aa16.14■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Smim5Q8BT42 78 aa16.14■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Pdzd9Q9D9M4 266 aa16.14■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Phlpp2Q8BXA7 1320 aa16.14■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Eif2ak4Q9QZ05 1648 aa16.14■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Ltv1Q6NSQ7 470 aaKnown RBP16.14■□□□□ 0.17
Clcn3-204ENSMUST00000110301 1700010I14RikQ7TPG0 532 aa16.14■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Myo5cE9Q1F5 1742 aa16.14■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Pdcd11Q6NS46 1862 aaKnown RBP16.13■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Pde4bB1AWC9 736 aa16.13■□□□□ 0.17
Clcn3-204ENSMUST00000110301 SympkQ80X82 1284 aa16.13■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Top1mtQ8R4U6 593 aa16.13■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Smc3Q9CW03 1217 aaKnown RBP16.13■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Zmym3Q9JLM4 1370 aa16.13■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Usp48Q3V0C5 1052 aa16.13■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Il1rapl2Q9ERS6 686 aa16.13■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Slf2Q6P9P0 1278 aa16.12■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Rbm10Q99KG3 930 aaKnown RBP16.12■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Fam135bQ9DAI6 1403 aa16.12■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Mroh1E0CZ22 1640 aa16.12■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Cct4P80315 539 aaKnown RBP16.12■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Nsfl1cQ9CZ44 370 aaKnown RBP16.12■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Bicc1Q99MQ1 977 aaKnown RBP16.12■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Kdm2bQ6P1G2 1309 aa16.11■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Pnmal2G3X9N3 661 aa16.11■□□□□ 0.17
Clcn3-204ENSMUST00000110301 SlkO54988 1233 aa16.11■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Grm8P47743 908 aa16.11■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Atp8b2P98199 1209 aa16.11■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Brd1E9PZ26 1189 aaKnown RBP16.11■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Abl1P00520 1123 aa16.11■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Babam1Q3UI43 333 aa16.11■□□□□ 0.17
Clcn3-204ENSMUST00000110301 EappQ5BU09 281 aa16.11■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Mum1Q6DID5 682 aa16.11■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Asic4Q7TNS7 539 aa16.11■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Eif4a1P60843 406 aaKnown RBP16.1■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Ddb1Q3U1J4 1140 aaKnown RBP16.1■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Tshz3Q8CGV9 1081 aa16.1■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Bag3Q9JLV1 577 aaKnown RBP16.1■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Rad17Q6NXW6 688 aa16.1■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Clcn1Q64347 994 aa16.09■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Kif24Q6NWW5 1356 aa16.09■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Nkx1-2P42580 305 aa16.09■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Gnat3Q3V3I2 354 aa16.09■□□□□ 0.17
Clcn3-204ENSMUST00000110301 R3hcc1Q8BSI6 488 aa16.09■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Q9D9S1 216 aa16.09■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Tecpr2Q3UH45 1423 aa16.09■□□□□ 0.17
Clcn3-204ENSMUST00000110301 PtpruB1AUH1 1446 aa16.09■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Pde4dQ01063 747 aa16.09■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Gsdma2Q32M21 443 aa16.09■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Ell2Q3UKU1 639 aa16.09■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Arhgef1Q61210 920 aaKnown RBP16.09■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Cwc25Q9DBF7 416 aa16.09■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Washc4Q3UMB9 1173 aa16.09■□□□□ 0.17
Clcn3-204ENSMUST00000110301 Psrc1Q9D0P7 329 aa16.09■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms