RNA–Protein interactions for RNA: ENSMUST00000103569.2

Trav3-1-201, Transcript of T cell receptor alpha variable 3-1 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav3-1, Length 385 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1-201ENSMUST00000103569 Efcab2Q9CQ46 164 aa19.52■□□□□ 0.72
Trav3-1-201ENSMUST00000103569 Col11a2Q64739 1736 aa19.51■□□□□ 0.71
Trav3-1-201ENSMUST00000103569 Plch1Q4KWH5 1682 aa19.48■□□□□ 0.71
Trav3-1-201ENSMUST00000103569 Adcy9P51830 1353 aa19.47■□□□□ 0.71
Trav3-1-201ENSMUST00000103569 Myo5bP21271 1818 aa19.47■□□□□ 0.71
Trav3-1-201ENSMUST00000103569 Rtf1A2AQ19 715 aaKnown RBP19.47■□□□□ 0.71
Trav3-1-201ENSMUST00000103569 Apaf1O88879 1249 aa19.47■□□□□ 0.71
Trav3-1-201ENSMUST00000103569 Pde4dQ01063 747 aa19.47■□□□□ 0.71
Trav3-1-201ENSMUST00000103569 RtcbQ99LF4 505 aaKnown RBP19.47■□□□□ 0.71
Trav3-1-201ENSMUST00000103569 Nav1Q8CH77 1875 aa19.46■□□□□ 0.71
Trav3-1-201ENSMUST00000103569 Ppm1fQ8CGA0 452 aa19.45■□□□□ 0.7
Trav3-1-201ENSMUST00000103569 CpzQ8R4V4 654 aa19.45■□□□□ 0.7
Trav3-1-201ENSMUST00000103569 Magea6O89010 325 aa19.44■□□□□ 0.7
Trav3-1-201ENSMUST00000103569 Clcn1Q64347 994 aa19.44■□□□□ 0.7
Trav3-1-201ENSMUST00000103569 Btbd11Q6GQW0 1109 aa19.44■□□□□ 0.7
Trav3-1-201ENSMUST00000103569 Magea3Q6T340 320 aa19.44■□□□□ 0.7
Trav3-1-201ENSMUST00000103569 DiexfQ8BTT6 772 aaKnown RBP19.44■□□□□ 0.7
Trav3-1-201ENSMUST00000103569 Znrd1-asQ8R0E5 213 aa19.44■□□□□ 0.7
Trav3-1-201ENSMUST00000103569 PigbQ9JJQ0 542 aa19.44■□□□□ 0.7
Trav3-1-201ENSMUST00000103569 Usp21Q9QZL6 566 aa19.44■□□□□ 0.7
Trav3-1-201ENSMUST00000103569 Syde2E9PUP1 1314 aa19.44■□□□□ 0.7
Trav3-1-201ENSMUST00000103569 Atf7ipQ7TT18 1306 aa19.43■□□□□ 0.7
Trav3-1-201ENSMUST00000103569 Mapk8ip3Q9ESN9 1337 aa19.43■□□□□ 0.7
Trav3-1-201ENSMUST00000103569 Tlr8P58682 1032 aa19.42■□□□□ 0.7
Trav3-1-201ENSMUST00000103569 Lrrc43Q3V0L5 667 aa19.42■□□□□ 0.7
Trav3-1-201ENSMUST00000103569 Wwc2Q6NXJ0 1187 aa19.42■□□□□ 0.7
Trav3-1-201ENSMUST00000103569 Slfnl1Q8BHW9 410 aa19.42■□□□□ 0.7
Trav3-1-201ENSMUST00000103569 Zfyve9A2A8R0 1397 aa19.42■□□□□ 0.7
Trav3-1-201ENSMUST00000103569 Egfem1Q8C088 590 aa19.41■□□□□ 0.7
Trav3-1-201ENSMUST00000103569 Amhr2Q8K592 568 aa19.4■□□□□ 0.7
Trav3-1-201ENSMUST00000103569 Prim1P20664 417 aa19.39■□□□□ 0.69
Trav3-1-201ENSMUST00000103569 HmcesQ8R1M0 353 aaKnown RBP19.39■□□□□ 0.69
Trav3-1-201ENSMUST00000103569 Mrps5Q99N87 432 aaKnown RBP19.39■□□□□ 0.69
Trav3-1-201ENSMUST00000103569 Togaram1Q6A070 1776 aaKnown RBP19.39■□□□□ 0.69
Trav3-1-201ENSMUST00000103569 Znf541Q0GGX2 1363 aa19.38■□□□□ 0.69
Trav3-1-201ENSMUST00000103569 Exoc6Q8R313 802 aa19.38■□□□□ 0.69
Trav3-1-201ENSMUST00000103569 Mylk2Q8VCR8 613 aa19.38■□□□□ 0.69
Trav3-1-201ENSMUST00000103569 Zbtb1Q91VL9 713 aa19.38■□□□□ 0.69
Trav3-1-201ENSMUST00000103569 1810065E05RikQ5NC41 235 aa19.37■□□□□ 0.69
Trav3-1-201ENSMUST00000103569 Sgip1Q8VD37 806 aa19.37■□□□□ 0.69
Trav3-1-201ENSMUST00000103569 MetP16056 1379 aa19.36■□□□□ 0.69
Trav3-1-201ENSMUST00000103569 Usp19Q3UJD6 1360 aa19.36■□□□□ 0.69
Trav3-1-201ENSMUST00000103569 Ggnbp2Q5SV77 696 aa19.36■□□□□ 0.69
Trav3-1-201ENSMUST00000103569 Srp68Q8BMA6 625 aaKnown RBP19.35■□□□□ 0.69
Trav3-1-201ENSMUST00000103569 ScaperF8VQ70 1398 aaKnown RBP19.34■□□□□ 0.69
Trav3-1-201ENSMUST00000103569 Cavin4A2AMM0 362 aa19.34■□□□□ 0.69
Trav3-1-201ENSMUST00000103569 Atp1b3P97370 278 aa19.34■□□□□ 0.69
Trav3-1-201ENSMUST00000103569 Zcwpw1Q6IR42 630 aa19.34■□□□□ 0.69
Trav3-1-201ENSMUST00000103569 Nip7Q9CXK8 180 aaKnown RBP19.34■□□□□ 0.69
Trav3-1-201ENSMUST00000103569 Col4a1P02463 1669 aa19.33■□□□□ 0.69
Trav3-1-201ENSMUST00000103569 Map4k4P97820 1233 aaKnown RBP19.33■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Rnf180Q3U827 592 aa19.33■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Gm12185Q5NCB2 835 aa19.33■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Golga2Q921M4 999 aa19.33■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Irx6Q9ER75 438 aa19.33■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Trip6Q9Z1Y4 480 aa19.33■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 StrcQ8VIM6 1809 aa19.32■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Ppef1O35655 650 aa19.32■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Cnnm1Q0GA42 951 aa19.32■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Iqsec3Q3TES0 1195 aa19.32■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Flad1Q8R123 492 aa19.31■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Camkk2Q8C078 588 aa19.3■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Swt1Q9DBQ9 907 aa19.3■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 TefQ9JLC6 301 aa19.3■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Esx1O88933 382 aa19.29■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Tgfb2P27090 414 aa19.29■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Prkab2Q6PAM0 271 aa19.29■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Nsfl1cQ9CZ44 370 aaKnown RBP19.29■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Dpf1Q9QX66 387 aa19.29■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Col1a2Q01149 1372 aa19.29■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Ubn2Q80WC1 1314 aa19.28■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Uhrf1bp1B2KF50 1429 aa19.28■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Eif4a1P60843 406 aaKnown RBP19.28■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Dusp27Q148W8 1138 aa19.28■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Cers3Q1A3B0 383 aa19.28■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Pdia6Q922R8 440 aaKnown RBP19.28■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Gigyf1Q99MR1 1044 aaKnown RBP19.28■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Tktl2Q9D4D4 627 aa19.28■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Kcnn1Q9EQR3 537 aa19.28■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Slurp2P0DP59 97 aa19.27■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Strn4P58404 760 aa19.27■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Zscan21Q07231 555 aa19.27■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Cyp2c67Q569X9 491 aa19.27■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Taf1dQ9D4V4 322 aa19.27■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Ddx60E9PZQ1 1711 aa19.27■□□□□ 0.68
Trav3-1-201ENSMUST00000103569 Prr5lA2AVJ5 370 aa19.26■□□□□ 0.67
Trav3-1-201ENSMUST00000103569 Rnaseh2aQ9CWY8 301 aa19.26■□□□□ 0.67
Trav3-1-201ENSMUST00000103569 Rapgef4Q9EQZ6 1011 aa19.26■□□□□ 0.67
Trav3-1-201ENSMUST00000103569 Rbm26Q6NZN0 1012 aaKnown RBP19.25■□□□□ 0.67
Trav3-1-201ENSMUST00000103569 Cyp2d12Q8BVD2 504 aa19.25■□□□□ 0.67
Trav3-1-201ENSMUST00000103569 Foxp4Q9DBY0 795 aaKnown RBP19.25■□□□□ 0.67
Trav3-1-201ENSMUST00000103569 Cfap70D3YVL2 1141 aa19.24■□□□□ 0.67
Trav3-1-201ENSMUST00000103569 Wdhd1P59328 1117 aa19.24■□□□□ 0.67
Trav3-1-201ENSMUST00000103569 Klhdc4Q921I2 584 aa19.24■□□□□ 0.67
Trav3-1-201ENSMUST00000103569 Senp3Q9EP97 568 aaKnown RBP19.24■□□□□ 0.67
Trav3-1-201ENSMUST00000103569 Igf2rQ07113 2483 aaKnown RBP19.24■□□□□ 0.67
Trav3-1-201ENSMUST00000103569 Bcl2l13P59017 434 aa19.23■□□□□ 0.67
Trav3-1-201ENSMUST00000103569 Gpr162Q3UN16 588 aa19.23■□□□□ 0.67
Trav3-1-201ENSMUST00000103569 Slc39a6Q8C145 765 aa19.23■□□□□ 0.67
Trav3-1-201ENSMUST00000103569 GckrQ91X44 587 aa19.23■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms