RNA–Protein interactions for RNA: ENSMUST00000102612.1

Ccdc42-202, Transcript of Coiled-coil domain-containing protein 42, mousemouse

TSL 1 (best) BASIC

Gene Ccdc42, Length 785 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc42-202ENSMUST00000102612 Miga2Q8BK03 593 aa13.65□□□□□ -0.22
Ccdc42-202ENSMUST00000102612 Plin1Q8CGN5 517 aa13.65□□□□□ -0.22
Ccdc42-202ENSMUST00000102612 Tgfb2P27090 414 aa13.64□□□□□ -0.23
Ccdc42-202ENSMUST00000102612 Camkk2Q8C078 588 aa13.64□□□□□ -0.23
Ccdc42-202ENSMUST00000102612 RtcbQ99LF4 505 aaKnown RBP13.63□□□□□ -0.23
Ccdc42-202ENSMUST00000102612 Cap2Q9CYT6 476 aa13.63□□□□□ -0.23
Ccdc42-202ENSMUST00000102612 P2rx7Q9Z1M0 595 aa13.63□□□□□ -0.23
Ccdc42-202ENSMUST00000102612 Aox2Q5SGK3 1345 aa13.63□□□□□ -0.23
Ccdc42-202ENSMUST00000102612 Ubr3Q5U430 1889 aa13.62□□□□□ -0.23
Ccdc42-202ENSMUST00000102612 Anp32bQ9EST5 272 aaKnown RBP13.62□□□□□ -0.23
Ccdc42-202ENSMUST00000102612 Plch1Q4KWH5 1682 aa13.62□□□□□ -0.23
Ccdc42-202ENSMUST00000102612 Sos1Q62245 1319 aa13.62□□□□□ -0.23
Ccdc42-202ENSMUST00000102612 Rab11fip3Q8CHD8 1047 aa13.61□□□□□ -0.23
Ccdc42-202ENSMUST00000102612 SnrkQ8VDU5 748 aa13.61□□□□□ -0.23
Ccdc42-202ENSMUST00000102612 Ric1Q69ZJ7 1422 aa13.61□□□□□ -0.23
Ccdc42-202ENSMUST00000102612 Smg7Q5RJH6 1138 aaKnown RBP13.6□□□□□ -0.23
Ccdc42-202ENSMUST00000102612 Adgre1Q61549 931 aa13.6□□□□□ -0.23
Ccdc42-202ENSMUST00000102612 CpzQ8R4V4 654 aa13.6□□□□□ -0.23
Ccdc42-202ENSMUST00000102612 Zfyve9A2A8R0 1397 aa13.59□□□□□ -0.23
Ccdc42-202ENSMUST00000102612 ScaperF8VQ70 1398 aaKnown RBP13.59□□□□□ -0.23
Ccdc42-202ENSMUST00000102612 Lrrc43Q3V0L5 667 aa13.59□□□□□ -0.23
Ccdc42-202ENSMUST00000102612 Fam122aQ9DB52 284 aa13.59□□□□□ -0.23
Ccdc42-202ENSMUST00000102612 Riok3Q9DBU3 519 aaKnown RBP13.59□□□□□ -0.23
Ccdc42-202ENSMUST00000102612 PalmQ9Z0P4 383 aa13.59□□□□□ -0.23
Ccdc42-202ENSMUST00000102612 Spef2Q8C9J3 1734 aa13.59□□□□□ -0.23
Ccdc42-202ENSMUST00000102612 Cfap70D3YVL2 1141 aa13.58□□□□□ -0.24
Ccdc42-202ENSMUST00000102612 Cyp2c69E9PXC3 491 aa13.58□□□□□ -0.24
Ccdc42-202ENSMUST00000102612 Cyp2c40P56657 491 aa13.58□□□□□ -0.24
Ccdc42-202ENSMUST00000102612 Tsen2Q6P7W5 460 aa13.58□□□□□ -0.24
Ccdc42-202ENSMUST00000102612 DiexfQ8BTT6 772 aaKnown RBP13.58□□□□□ -0.24
Ccdc42-202ENSMUST00000102612 Spon1Q8VCC9 807 aa13.58□□□□□ -0.24
Ccdc42-202ENSMUST00000102612 Taf1dQ9D4V4 322 aa13.58□□□□□ -0.24
Ccdc42-202ENSMUST00000102612 Trpm3Q5F4S9 1721 aa13.58□□□□□ -0.24
Ccdc42-202ENSMUST00000102612 TnikP83510 1323 aa13.58□□□□□ -0.24
Ccdc42-202ENSMUST00000102612 Tlr8P58682 1032 aa13.57□□□□□ -0.24
Ccdc42-202ENSMUST00000102612 Mcm10Q0VBD2 885 aa13.57□□□□□ -0.24
Ccdc42-202ENSMUST00000102612 Prm3Q62100 101 aa13.57□□□□□ -0.24
Ccdc42-202ENSMUST00000102612 Amhr2Q8K592 568 aa13.57□□□□□ -0.24
Ccdc42-202ENSMUST00000102612 C4bP01029 1738 aa13.56□□□□□ -0.24
Ccdc42-202ENSMUST00000102612 Col11a2Q64739 1736 aa13.56□□□□□ -0.24
Ccdc42-202ENSMUST00000102612 Pde4dQ01063 747 aa13.56□□□□□ -0.24
Ccdc42-202ENSMUST00000102612 Cyp2c67Q569X9 491 aa13.56□□□□□ -0.24
Ccdc42-202ENSMUST00000102612 1810065E05RikQ5NC41 235 aa13.56□□□□□ -0.24
Ccdc42-202ENSMUST00000102612 Ccdc155Q80VJ8 648 aa13.56□□□□□ -0.24
Ccdc42-202ENSMUST00000102612 FktnQ8R507 461 aa13.56□□□□□ -0.24
Ccdc42-202ENSMUST00000102612 U2af1Q9D883 239 aaKnown RBP13.56□□□□□ -0.24
Ccdc42-202ENSMUST00000102612 GsdmaQ9EST1 446 aa13.56□□□□□ -0.24
Ccdc42-202ENSMUST00000102612 Nkx2-3P97334 362 aa13.55□□□□□ -0.24
Ccdc42-202ENSMUST00000102612 Casz1Q9CWL2 1761 aa13.54□□□□□ -0.24
Ccdc42-202ENSMUST00000102612 Q7TT23 1179 aa13.54□□□□□ -0.24
Ccdc42-202ENSMUST00000102612 HmcesQ8R1M0 353 aaKnown RBP13.54□□□□□ -0.24
Ccdc42-202ENSMUST00000102612 Tcerg1Q8CGF7 1100 aaKnown RBP13.53□□□□□ -0.24
Ccdc42-202ENSMUST00000102612 Stk31Q99MW1 1018 aa13.53□□□□□ -0.24
Ccdc42-202ENSMUST00000102612 Kndc1Q0KK55 1742 aa13.53□□□□□ -0.24
Ccdc42-202ENSMUST00000102612 Wdhd1P59328 1117 aa13.52□□□□□ -0.25
Ccdc42-202ENSMUST00000102612 Wwc2Q6NXJ0 1187 aa13.52□□□□□ -0.25
Ccdc42-202ENSMUST00000102612 Rpgrip1lQ8CG73 1264 aa13.52□□□□□ -0.25
Ccdc42-202ENSMUST00000102612 Rtn4Q99P72 1162 aaKnown RBP13.52□□□□□ -0.25
Ccdc42-202ENSMUST00000102612 AceP09470 1312 aa13.52□□□□□ -0.25
Ccdc42-202ENSMUST00000102612 Ubr2Q6WKZ8 1755 aa13.52□□□□□ -0.25
Ccdc42-202ENSMUST00000102612 Adcy9P51830 1353 aa13.51□□□□□ -0.25
Ccdc42-202ENSMUST00000102612 TmpoQ61033 693 aaKnown RBP13.51□□□□□ -0.25
Ccdc42-202ENSMUST00000102612 TrhQ62361 256 aa13.51□□□□□ -0.25
Ccdc42-202ENSMUST00000102612 Efcab2Q9CQ46 164 aa13.51□□□□□ -0.25
Ccdc42-202ENSMUST00000102612 Togaram1Q6A070 1776 aaKnown RBP13.5□□□□□ -0.25
Ccdc42-202ENSMUST00000102612 Zdbf2Q5SS00 2493 aaKnown RBP13.49□□□□□ -0.25
Ccdc42-202ENSMUST00000102612 Rbm26Q6NZN0 1012 aaKnown RBP13.49□□□□□ -0.25
Ccdc42-202ENSMUST00000102612 Exoc6Q8R313 802 aa13.49□□□□□ -0.25
Ccdc42-202ENSMUST00000102612 Iqcf3Q9D498 203 aa13.49□□□□□ -0.25
Ccdc42-202ENSMUST00000102612 Snap23O09044 210 aa13.48□□□□□ -0.25
Ccdc42-202ENSMUST00000102612 Slfnl1Q8BHW9 410 aa13.48□□□□□ -0.25
Ccdc42-202ENSMUST00000102612 Srp68Q8BMA6 625 aaKnown RBP13.48□□□□□ -0.25
Ccdc42-202ENSMUST00000102612 Cabp2Q9JLK4 216 aa13.48□□□□□ -0.25
Ccdc42-202ENSMUST00000102612 Syde2E9PUP1 1314 aa13.47□□□□□ -0.25
Ccdc42-202ENSMUST00000102612 Cyp2c68K7N6C2 491 aa13.47□□□□□ -0.25
Ccdc42-202ENSMUST00000102612 Nedd4P46935 887 aaKnown RBP13.47□□□□□ -0.25
Ccdc42-202ENSMUST00000102612 Atp1b3P97370 278 aa13.47□□□□□ -0.25
Ccdc42-202ENSMUST00000102612 Clcn1Q64347 994 aa13.47□□□□□ -0.25
Ccdc42-202ENSMUST00000102612 IarsQ8BU30 1262 aa13.47□□□□□ -0.25
Ccdc42-202ENSMUST00000102612 Pde3aQ9Z0X4 1141 aa13.47□□□□□ -0.25
Ccdc42-202ENSMUST00000102612 Tiam2Q6ZPF3 1715 aa13.47□□□□□ -0.25
Ccdc42-202ENSMUST00000102612 NogP97466 232 aa13.46□□□□□ -0.25
Ccdc42-202ENSMUST00000102612 Mylk2Q8VCR8 613 aa13.46□□□□□ -0.25
Ccdc42-202ENSMUST00000102612 Klhdc4Q921I2 584 aa13.46□□□□□ -0.25
Ccdc42-202ENSMUST00000102612 Abcc12Q80WJ6 1366 aa13.45□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 Ubn2Q80WC1 1314 aa13.45□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 G430095P16RikE9Q913 147 aa13.45□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 Akap2O54931 893 aa13.45□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 Zbtb1Q91VL9 713 aa13.45□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 StrcQ8VIM6 1809 aa13.45□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 Megf6Q80V70 1572 aa13.45□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 Mapk8ip3Q9ESN9 1337 aa13.44□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 Nip7Q9CXK8 180 aaKnown RBP13.44□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 Nsfl1cQ9CZ44 370 aaKnown RBP13.44□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 PigbQ9JJQ0 542 aa13.44□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 Dpf1Q9QX66 387 aa13.44□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 Trip6Q9Z1Y4 480 aa13.44□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 Prdm11A2AGX3 565 aa13.43□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 Apaf1O88879 1249 aa13.43□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 Lmnb1P14733 588 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms