RNA–Protein interactions for RNA: ENSMUST00000100942.8

Vamp1-203, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Vamp1, Length 3,011 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-203ENSMUST00000100942 Sv2bQ8BG39 683 aa15.17■□□□□ 0.02
Vamp1-203ENSMUST00000100942 Amotl1Q9D4H4 968 aa15.17■□□□□ 0.02
Vamp1-203ENSMUST00000100942 Cetn4Q8K4K1 168 aa15.17■□□□□ 0.02
Vamp1-203ENSMUST00000100942 Cog6Q8R3I3 657 aa15.17■□□□□ 0.02
Vamp1-203ENSMUST00000100942 CarsQ9ER72 831 aaKnown RBP15.17■□□□□ 0.02
Vamp1-203ENSMUST00000100942 Rabep1O35551 862 aa15.16■□□□□ 0.02
Vamp1-203ENSMUST00000100942 Kcna6Q61923 529 aa15.16■□□□□ 0.02
Vamp1-203ENSMUST00000100942 Fmnl2A2APV2 1086 aa15.16■□□□□ 0.02
Vamp1-203ENSMUST00000100942 Evi5lH3BKQ3 813 aa15.16■□□□□ 0.02
Vamp1-203ENSMUST00000100942 Atf5O70191 283 aa15.16■□□□□ 0.02
Vamp1-203ENSMUST00000100942 Cyp2d12Q8BVD2 504 aa15.16■□□□□ 0.02
Vamp1-203ENSMUST00000100942 Gtf3c5Q8R2T8 520 aa15.16■□□□□ 0.02
Vamp1-203ENSMUST00000100942 Trim44Q9QXA7 346 aa15.15■□□□□ 0.02
Vamp1-203ENSMUST00000100942 TnrQ8BYI9 1358 aa15.14■□□□□ 0.01
Vamp1-203ENSMUST00000100942 Triml2E9PW10 424 aa15.14■□□□□ 0.01
Vamp1-203ENSMUST00000100942 Fam83gQ5SWY7 812 aa15.14■□□□□ 0.01
Vamp1-203ENSMUST00000100942 Farp2Q91VS8 1065 aa15.14■□□□□ 0.01
Vamp1-203ENSMUST00000100942 Nsfl1cQ9CZ44 370 aaKnown RBP15.14■□□□□ 0.01
Vamp1-203ENSMUST00000100942 KnstrnQ9D9Z1 312 aaKnown RBP15.14■□□□□ 0.01
Vamp1-203ENSMUST00000100942 Q3TQI7 289 aaKnown RBP15.14■□□□□ 0.01
Vamp1-203ENSMUST00000100942 HnrnpuQ8VEK3 800 aaKnown RBP15.14■□□□□ 0.01
Vamp1-203ENSMUST00000100942 Wdr63B2RY71 923 aa15.14■□□□□ 0.01
Vamp1-203ENSMUST00000100942 Ppp1r37Q8BKR5 712 aa15.14■□□□□ 0.01
Vamp1-203ENSMUST00000100942 Scn4aQ9ER60 1841 aa15.14■□□□□ 0.01
Vamp1-203ENSMUST00000100942 Prkar2bP31324 416 aa15.13■□□□□ 0.01
Vamp1-203ENSMUST00000100942 Aldh8a1Q8BH00 487 aa15.13■□□□□ 0.01
Vamp1-203ENSMUST00000100942 Fam13aQ8BGI4 693 aa15.13■□□□□ 0.01
Vamp1-203ENSMUST00000100942 Dzip1Q8BMD2 852 aa15.13■□□□□ 0.01
Vamp1-203ENSMUST00000100942 Pnpla7A2AJ88 1352 aa15.13■□□□□ 0.01
Vamp1-203ENSMUST00000100942 Abcc12Q80WJ6 1366 aa15.12■□□□□ 0.01
Vamp1-203ENSMUST00000100942 Chpf2Q3UU43 768 aa15.12■□□□□ 0.01
Vamp1-203ENSMUST00000100942 Kif2cQ922S8 721 aa15.11■□□□□ 0.01
Vamp1-203ENSMUST00000100942 GnpatP98192 678 aa15.11■□□□□ 0.01
Vamp1-203ENSMUST00000100942 Rbm10Q99KG3 930 aaKnown RBP15.11■□□□□ 0.01
Vamp1-203ENSMUST00000100942 Nkx2-3P97334 362 aa15.11■□□□□ 0.01
Vamp1-203ENSMUST00000100942 Eif4g2Q62448 906 aaKnown RBP15.11■□□□□ 0.01
Vamp1-203ENSMUST00000100942 Aox2Q5SGK3 1345 aa15.1■□□□□ 0.01
Vamp1-203ENSMUST00000100942 Cgnl1Q6AW69 1298 aa15.1■□□□□ 0.01
Vamp1-203ENSMUST00000100942 FanclQ9CR14 375 aa15.1■□□□□ 0.01
Vamp1-203ENSMUST00000100942 Col15a1O35206 1367 aa15.09■□□□□ 0.01
Vamp1-203ENSMUST00000100942 Chmp4cQ9D7F7 232 aa15.09■□□□□ 0.01
Vamp1-203ENSMUST00000100942 BcorQ8CGN4 1759 aa15.09■□□□□ 0.01
Vamp1-203ENSMUST00000100942 Rapgef3Q8VCC8 918 aa15.09■□□□□ 0.01
Vamp1-203ENSMUST00000100942 Chrna2Q91X60 512 aa15.09■□□□□ 0.01
Vamp1-203ENSMUST00000100942 Disp3A3KFU9 1347 aa15.08■□□□□ 0.01
Vamp1-203ENSMUST00000100942 Eif4a1P60843 406 aaKnown RBP15.08■□□□□ 0
Vamp1-203ENSMUST00000100942 Gcc1Q9D4H2 778 aa15.08■□□□□ 0
Vamp1-203ENSMUST00000100942 Ddx17Q501J6 650 aaKnown RBP15.08■□□□□ 0
Vamp1-203ENSMUST00000100942 Dixdc1Q80Y83 711 aa15.08■□□□□ 0
Vamp1-203ENSMUST00000100942 Simc1E9Q6E9 1354 aa15.07■□□□□ 0
Vamp1-203ENSMUST00000100942 Zfp91Q62511 572 aa15.07■□□□□ 0
Vamp1-203ENSMUST00000100942 Tnnt1O88346 262 aa15.07■□□□□ 0
Vamp1-203ENSMUST00000100942 Cyp2d11P24457 504 aa15.07■□□□□ 0
Vamp1-203ENSMUST00000100942 Nol11Q8BJW5 723 aaKnown RBP15.07■□□□□ 0
Vamp1-203ENSMUST00000100942 Atf3Q60765 181 aa15.06■□□□□ 0
Vamp1-203ENSMUST00000100942 Amigo3Q8C2S7 508 aa15.06■□□□□ 0
Vamp1-203ENSMUST00000100942 Erich6bQ9D4S6 220 aa15.06■□□□□ 0
Vamp1-203ENSMUST00000100942 Cnksr1A2A9K7 700 aa15.06■□□□□ 0
Vamp1-203ENSMUST00000100942 Ccdc146E9Q9F7 977 aa15.06■□□□□ 0
Vamp1-203ENSMUST00000100942 Tbc1d9Q3UYK3 1264 aa15.06■□□□□ 0
Vamp1-203ENSMUST00000100942 Arhgef1Q61210 920 aaKnown RBP15.06■□□□□ 0
Vamp1-203ENSMUST00000100942 Ltbp4Q8K4G1 1666 aa15.05■□□□□ 0
Vamp1-203ENSMUST00000100942 CoilQ5SU73 570 aa15.05■□□□□ 0
Vamp1-203ENSMUST00000100942 Mcm2P97310 904 aa15.05■□□□□ -0
Vamp1-203ENSMUST00000100942 Col1a2Q01149 1372 aa15.05■□□□□ -0
Vamp1-203ENSMUST00000100942 Smarca5Q91ZW3 1051 aaKnown RBP15.05■□□□□ -0
Vamp1-203ENSMUST00000100942 Gnai2P08752 355 aaKnown RBP15.04■□□□□ -0
Vamp1-203ENSMUST00000100942 Tnks1bp1P58871 1720 aa15.04■□□□□ -0
Vamp1-203ENSMUST00000100942 Tfip11Q9ERA6 838 aaKnown RBP15.04■□□□□ -0
Vamp1-203ENSMUST00000100942 FocadA2AKG8 1798 aa15.04■□□□□ -0
Vamp1-203ENSMUST00000100942 Atg4a-psA0A0G2JFS9 396 aa15.03■□□□□ -0
Vamp1-203ENSMUST00000100942 Irf5P56477 497 aa15.03■□□□□ -0
Vamp1-203ENSMUST00000100942 VgfQ0VGU4 617 aa15.03■□□□□ -0
Vamp1-203ENSMUST00000100942 Btbd11Q6GQW0 1109 aa15.03■□□□□ -0
Vamp1-203ENSMUST00000100942 Atg4aQ8C9S8 396 aa15.03■□□□□ -0
Vamp1-203ENSMUST00000100942 Nek4Q9Z1J2 792 aa15.03■□□□□ -0
Vamp1-203ENSMUST00000100942 Abca15E9PWH4 1668 aa15.03■□□□□ -0
Vamp1-203ENSMUST00000100942 OptnQ8K3K8 584 aa15.03■□□□□ -0
Vamp1-203ENSMUST00000100942 CenppQ9CZ92 286 aa15.03■□□□□ -0
Vamp1-203ENSMUST00000100942 Stk36Q69ZM6 1316 aa15.03■□□□□ -0
Vamp1-203ENSMUST00000100942 Terf2O35144 541 aa15.03■□□□□ -0
Vamp1-203ENSMUST00000100942 Brwd3A2AHJ4 1799 aa15.02■□□□□ -0
Vamp1-203ENSMUST00000100942 Lekr1B2RVN1 116 aa15.02■□□□□ -0
Vamp1-203ENSMUST00000100942 Gm10471E9Q1C7 252 aa15.02■□□□□ -0
Vamp1-203ENSMUST00000100942 Dhx16G3X8X0 1044 aaKnown RBP15.02■□□□□ -0
Vamp1-203ENSMUST00000100942 Gse1Q3U3C9 1213 aa15.02■□□□□ -0
Vamp1-203ENSMUST00000100942 Pdcl2Q78Y63 240 aa15.02■□□□□ -0
Vamp1-203ENSMUST00000100942 TkfcQ8VC30 578 aa15.02■□□□□ -0
Vamp1-203ENSMUST00000100942 Gm21698A0A087WQP8 267 aa15.02□□□□□ -0.01
Vamp1-203ENSMUST00000100942 Gm21671G3UY31 267 aa15.02□□□□□ -0.01
Vamp1-203ENSMUST00000100942 Cc2d1aQ8K1A6 943 aa15.02□□□□□ -0.01
Vamp1-203ENSMUST00000100942 Irx6Q9ER75 438 aa15.02□□□□□ -0.01
Vamp1-203ENSMUST00000100942 Ripk4Q9ERK0 786 aa15.02□□□□□ -0.01
Vamp1-203ENSMUST00000100942 Card10P58660 1021 aa15.01□□□□□ -0.01
Vamp1-203ENSMUST00000100942 Pdia4P08003 638 aaKnown RBP15.01□□□□□ -0.01
Vamp1-203ENSMUST00000100942 CrklP47941 303 aa15.01□□□□□ -0.01
Vamp1-203ENSMUST00000100942 Srgap3Q812A2 1099 aa15.01□□□□□ -0.01
Vamp1-203ENSMUST00000100942 ScaperF8VQ70 1398 aaKnown RBP15□□□□□ -0.01
Vamp1-203ENSMUST00000100942 Bcl9lQ67FY2 1494 aa15□□□□□ -0.01
Vamp1-203ENSMUST00000100942 Gm10093D3YYI8 482 aa15□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms