RNA–Protein interactions for RNA: ENSMUST00000088653.2

Ccdc87-201, Transcript of Coiled-coil domain-containing protein 87, mousemouse

APPRIS P1 BASIC

Gene Ccdc87, Length 3,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87-201ENSMUST00000088653 Nkx2-3P97334 362 aa12.88□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 CoilQ5SU73 570 aa12.88□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 Tnpo1Q8BFY9 898 aaKnown RBP12.87□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 TkfcQ8VC30 578 aa12.87□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 Ubr2Q6WKZ8 1755 aa12.87□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 Gnai2P08752 355 aaKnown RBP12.87□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 Cyp2d11P24457 504 aa12.87□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 Card10P58660 1021 aa12.87□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 Amigo3Q8C2S7 508 aa12.87□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 OptnQ8K3K8 584 aa12.87□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 Tns2Q8CGB6 1400 aa12.86□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 Arhgef1Q61210 920 aaKnown RBP12.86□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 Tbc1d9Q3UYK3 1264 aa12.86□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 Ddx17Q501J6 650 aaKnown RBP12.86□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 Btbd11Q6GQW0 1109 aa12.86□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 Slit1Q80TR4 1531 aa12.86□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 Gm21698A0A087WQP8 267 aa12.85□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 Gm10471E9Q1C7 252 aa12.85□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 Gm21671G3UY31 267 aa12.85□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 CrklP47941 303 aa12.85□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 Ccdc146E9Q9F7 977 aa12.85□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 Tnnt1O88346 262 aa12.85□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 CenppQ9CZ92 286 aa12.85□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 Atp10bB1AWN4 1474 aa12.85□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 Zfp142G5E869 1843 aa12.85□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 Atg4a-psA0A0G2JFS9 396 aa12.85□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 Atg4aQ8C9S8 396 aa12.85□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 Atp8b2P98199 1209 aa12.84□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 Tmem119Q8R138 280 aa12.84□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 Smarca5Q91ZW3 1051 aaKnown RBP12.84□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 Atg3Q9CPX6 314 aa12.83□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 Nek4Q9Z1J2 792 aa12.83□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 Anapc15-psA0A140T8L6 141 aa12.83□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Gm10093D3YYI8 482 aa12.83□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Hdac1O09106 482 aaKnown RBP12.83□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 ThemisQ8BGW0 636 aa12.83□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Pdzd9Q9D9M4 266 aa12.83□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Echdc1Q9D9V3 322 aa12.83□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Mmp8O70138 465 aa12.82□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Ppp1r42Q8R1Z4 357 aa12.82□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Nphp1Q9QY53 687 aa12.82□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Srgap3Q812A2 1099 aa12.81□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Tjp1P39447 1745 aaKnown RBP12.81□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Cyp46a1Q9WVK8 500 aa12.81□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Flt4P35917 1363 aa12.81□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Adcy9P51830 1353 aa12.81□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 PsapQ61207 557 aaKnown RBP12.81□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Bend3Q6PAL0 825 aa12.8□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Cc2d1aQ8K1A6 943 aa12.8□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Phkg2Q9DB30 406 aa12.8□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Fkbp4P30416 458 aa12.8□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 GckrQ91X44 587 aa12.8□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 ArxO35085 564 aa12.79□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Pip4k2bQ80XI4 416 aa12.79□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Taf7Q9R1C0 341 aa12.79□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Hsp90aa1P07901 733 aaKnown RBP12.79□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Brinp3Q499E0 766 aa12.79□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Irx6Q9ER75 438 aa12.79□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Hoxa7P02830 229 aa12.78□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Pdia3P27773 505 aaKnown RBP12.78□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Ppp6r3Q922D4 844 aa12.78□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Nucb1Q02819 459 aaKnown RBP12.78□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Zranb3Q6NZP1 1069 aa12.78□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Mcmdc2E9Q956 681 aa12.77□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Cwc27Q3TKY6 469 aa12.77□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 RgmbQ7TQ33 436 aa12.77□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Ccdc155Q80VJ8 648 aa12.77□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Cadps2Q8BYR5 1297 aa12.77□□□□□ -0.36
Ccdc87-201ENSMUST00000088653 Terf2O35144 541 aa12.77□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 Chmp7Q8R1T1 451 aa12.77□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 Ssfa2Q922B9 1252 aa12.77□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 Ddx60E9PZQ1 1711 aa12.77□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 Ier5O89113 308 aa12.76□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 Zap70P43404 618 aa12.76□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 Iqsec3Q3TES0 1195 aa12.76□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 Morc2aQ69ZX6 1030 aa12.76□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 SympkQ80X82 1284 aa12.76□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 4930572O03RikQ8C5Y0 211 aa12.76□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 Pdia6Q922R8 440 aaKnown RBP12.76□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 Bcar3Q9QZK2 820 aa12.76□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 Exoc6bA6H5Z3 810 aa12.75□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 Zkscan2G3X952 960 aa12.75□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 Htatsf1Q8BGC0 757 aa12.75□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 Tfip11Q9ERA6 838 aaKnown RBP12.75□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 Rnf123Q5XPI3 1314 aa12.75□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 Ppip5k2Q6ZQB6 1129 aa12.75□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 Pdlim2Q8R1G6 349 aa12.75□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 Marf1Q8BJ34 1730 aaKnown RBP12.75□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 Catsper2A2ARP9 588 aa12.75□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 Plekhd1B2RPU2 505 aa12.75□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 HellsQ60848 821 aa12.75□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 Irf9Q61179 399 aa12.75□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 Elp1Q7TT37 1333 aaKnown RBP12.74□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 Map3k2Q61083 619 aa12.74□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 Asic4Q7TNS7 539 aa12.74□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 Mphosph10Q810V0 681 aaKnown RBP12.74□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 Eif3aP23116 1344 aaKnown RBP12.74□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 Shank2Q80Z38 1476 aa12.74□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 Tlr7P58681 1050 aa12.73□□□□□ -0.37
Ccdc87-201ENSMUST00000088653 Bcl2l13P59017 434 aa12.73□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 12 ms