RNA–Protein interactions for RNA: ENSMUST00000078680.12

Ush1c-202, Transcript of Harmonin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ush1c, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1c-202ENSMUST00000078680 Eif3bQ8JZQ9 803 aaKnown RBP18.8■□□□□ 0.6
Ush1c-202ENSMUST00000078680 Gnai1B2RSH2 354 aa18.79■□□□□ 0.6
Ush1c-202ENSMUST00000078680 Rbm25B2RY56 838 aaKnown RBP18.79■□□□□ 0.6
Ush1c-202ENSMUST00000078680 Gnai3Q9DC51 354 aa18.79■□□□□ 0.6
Ush1c-202ENSMUST00000078680 Trpm3Q5F4S9 1721 aa18.79■□□□□ 0.6
Ush1c-202ENSMUST00000078680 Pdcl3Q8BVF2 240 aa18.79■□□□□ 0.6
Ush1c-202ENSMUST00000078680 4933402E13RikQ9D4D2 429 aa18.79■□□□□ 0.6
Ush1c-202ENSMUST00000078680 Apbb1Q9QXJ1 710 aa18.79■□□□□ 0.6
Ush1c-202ENSMUST00000078680 GakQ99KY4 1305 aa18.78■□□□□ 0.6
Ush1c-202ENSMUST00000078680 CastP51125 788 aa18.78■□□□□ 0.6
Ush1c-202ENSMUST00000078680 Asic4Q7TNS7 539 aa18.78■□□□□ 0.6
Ush1c-202ENSMUST00000078680 Polr3glQ8R0C0 218 aa18.78■□□□□ 0.6
Ush1c-202ENSMUST00000078680 Rtf1A2AQ19 715 aaKnown RBP18.77■□□□□ 0.6
Ush1c-202ENSMUST00000078680 Nkx2-3P97334 362 aa18.77■□□□□ 0.6
Ush1c-202ENSMUST00000078680 Sugp2Q8CH09 1067 aa18.77■□□□□ 0.6
Ush1c-202ENSMUST00000078680 Sos1Q62245 1319 aa18.76■□□□□ 0.59
Ush1c-202ENSMUST00000078680 Gm21663A0A0G2JE01 267 aa18.76■□□□□ 0.59
Ush1c-202ENSMUST00000078680 Gm7361D3Z6R1 267 aa18.76■□□□□ 0.59
Ush1c-202ENSMUST00000078680 5031410I06RikE9Q4E0 267 aa18.76■□□□□ 0.59
Ush1c-202ENSMUST00000078680 Gm1979E9QAN3 267 aa18.76■□□□□ 0.59
Ush1c-202ENSMUST00000078680 Gm5862K7N5V5 267 aa18.76■□□□□ 0.59
Ush1c-202ENSMUST00000078680 Gm10220K7N660 267 aa18.76■□□□□ 0.59
Ush1c-202ENSMUST00000078680 Chmp7Q8R1T1 451 aa18.76■□□□□ 0.59
Ush1c-202ENSMUST00000078680 Ssfa2Q922B9 1252 aa18.76■□□□□ 0.59
Ush1c-202ENSMUST00000078680 Slc5a1Q8C3K6 665 aa18.76■□□□□ 0.59
Ush1c-202ENSMUST00000078680 Ubap1lG3UW59 384 aa18.75■□□□□ 0.59
Ush1c-202ENSMUST00000078680 Kiaa0319Q5SZV5 1081 aa18.75■□□□□ 0.59
Ush1c-202ENSMUST00000078680 Cdc37l1Q9CZP7 335 aa18.74■□□□□ 0.59
Ush1c-202ENSMUST00000078680 Tspyl2Q7TQI8 677 aa18.73■□□□□ 0.59
Ush1c-202ENSMUST00000078680 Bsdc1Q80Y55 427 aa18.73■□□□□ 0.59
Ush1c-202ENSMUST00000078680 Kcnn1Q9EQR3 537 aa18.73■□□□□ 0.59
Ush1c-202ENSMUST00000078680 Ppp6r1Q7TSI3 856 aa18.73■□□□□ 0.59
Ush1c-202ENSMUST00000078680 AU015836B2RUM3 263 aa18.72■□□□□ 0.59
Ush1c-202ENSMUST00000078680 Trim26Q99PN3 545 aa18.72■□□□□ 0.59
Ush1c-202ENSMUST00000078680 Zcrb1Q9CZ96 217 aaKnown RBP18.72■□□□□ 0.59
Ush1c-202ENSMUST00000078680 Lrit1Q8K099 624 aa18.71■□□□□ 0.59
Ush1c-202ENSMUST00000078680 ApobrQ8VBT6 942 aa18.71■□□□□ 0.59
Ush1c-202ENSMUST00000078680 Abcc12Q80WJ6 1366 aa18.71■□□□□ 0.59
Ush1c-202ENSMUST00000078680 Sptbn5F6UCX4 1208 aa18.7■□□□□ 0.58
Ush1c-202ENSMUST00000078680 Ccnl1Q52KE7 532 aaKnown RBP18.7■□□□□ 0.58
Ush1c-202ENSMUST00000078680 Ccdc155Q80VJ8 648 aa18.7■□□□□ 0.58
Ush1c-202ENSMUST00000078680 Ccdc60Q8C4J0 545 aa18.7■□□□□ 0.58
Ush1c-202ENSMUST00000078680 Ints5Q8CHT3 1018 aa18.7■□□□□ 0.58
Ush1c-202ENSMUST00000078680 Ppfibp2O35711 882 aa18.69■□□□□ 0.58
Ush1c-202ENSMUST00000078680 Gtf2a1Q99PM3 378 aa18.69■□□□□ 0.58
Ush1c-202ENSMUST00000078680 Rgs17Q9QZB0 210 aa18.69■□□□□ 0.58
Ush1c-202ENSMUST00000078680 Ly75Q60767 1723 aa18.69■□□□□ 0.58
Ush1c-202ENSMUST00000078680 Prim1P20664 417 aa18.69■□□□□ 0.58
Ush1c-202ENSMUST00000078680 Ppp2r3aB2RXC8 1150 aa18.68■□□□□ 0.58
Ush1c-202ENSMUST00000078680 G3bp1P97855 465 aaKnown RBP18.68■□□□□ 0.58
Ush1c-202ENSMUST00000078680 4930567H17RikQ3V0K5 233 aa18.68■□□□□ 0.58
Ush1c-202ENSMUST00000078680 Pank1Q8K4K6 548 aa18.68■□□□□ 0.58
Ush1c-202ENSMUST00000078680 Ggnbp2Q5SV77 696 aa18.67■□□□□ 0.58
Ush1c-202ENSMUST00000078680 Pnpla7A2AJ88 1352 aa18.67■□□□□ 0.58
Ush1c-202ENSMUST00000078680 PappaQ8R4K8 1624 aa18.66■□□□□ 0.58
Ush1c-202ENSMUST00000078680 Crb1Q8VHS2 1405 aa18.66■□□□□ 0.58
Ush1c-202ENSMUST00000078680 Pknox2Q8BG99 474 aa18.66■□□□□ 0.58
Ush1c-202ENSMUST00000078680 Senp3Q9EP97 568 aaKnown RBP18.66■□□□□ 0.58
Ush1c-202ENSMUST00000078680 Duxf3A0A0N4SV92 674 aa18.65■□□□□ 0.58
Ush1c-202ENSMUST00000078680 Rabep1O35551 862 aa18.65■□□□□ 0.58
Ush1c-202ENSMUST00000078680 Kif20aP97329 887 aa18.65■□□□□ 0.58
Ush1c-202ENSMUST00000078680 Klhdc4Q921I2 584 aa18.65■□□□□ 0.58
Ush1c-202ENSMUST00000078680 Phf14Q9D4H9 881 aa18.65■□□□□ 0.58
Ush1c-202ENSMUST00000078680 GalcP54818 684 aa18.64■□□□□ 0.58
Ush1c-202ENSMUST00000078680 Tbc1d32Q3URV1 1296 aa18.64■□□□□ 0.58
Ush1c-202ENSMUST00000078680 Cavin2Q63918 418 aaKnown RBP18.64■□□□□ 0.58
Ush1c-202ENSMUST00000078680 Usp16Q99LG0 825 aa18.64■□□□□ 0.58
Ush1c-202ENSMUST00000078680 Rlbp1Q9Z275 317 aa18.64■□□□□ 0.58
Ush1c-202ENSMUST00000078680 Vamp4O70480 141 aa18.64■□□□□ 0.57
Ush1c-202ENSMUST00000078680 Atl3Q91YH5 541 aa18.64■□□□□ 0.57
Ush1c-202ENSMUST00000078680 Gm6268A2A3U9 297 aa18.63■□□□□ 0.57
Ush1c-202ENSMUST00000078680 Btbd11Q6GQW0 1109 aa18.63■□□□□ 0.57
Ush1c-202ENSMUST00000078680 Afg3l2Q8JZQ2 802 aaKnown RBP18.62■□□□□ 0.57
Ush1c-202ENSMUST00000078680 Rps6ka4Q9Z2B9 773 aa18.62■□□□□ 0.57
Ush1c-202ENSMUST00000078680 Hdac6Q9Z2V5 1149 aa18.62■□□□□ 0.57
Ush1c-202ENSMUST00000078680 Arhgap33Q80YF9 1305 aa18.61■□□□□ 0.57
Ush1c-202ENSMUST00000078680 Antxr1Q9CZ52 562 aa18.61■□□□□ 0.57
Ush1c-202ENSMUST00000078680 U2surpQ6NV83 1029 aaKnown RBP18.61■□□□□ 0.57
Ush1c-202ENSMUST00000078680 Plekhm2Q80TQ5 1018 aa18.61■□□□□ 0.57
Ush1c-202ENSMUST00000078680 Chmp4bQ9D8B3 224 aaKnown RBP18.61■□□□□ 0.57
Ush1c-202ENSMUST00000078680 Ubr2Q6WKZ8 1755 aa18.6■□□□□ 0.57
Ush1c-202ENSMUST00000078680 Ccdc6D3YZP9 469 aa18.59■□□□□ 0.57
Ush1c-202ENSMUST00000078680 Tjp1P39447 1745 aaKnown RBP18.59■□□□□ 0.57
Ush1c-202ENSMUST00000078680 KarsQ99MN1 595 aaKnown RBP18.59■□□□□ 0.57
Ush1c-202ENSMUST00000078680 Atg3Q9CPX6 314 aa18.59■□□□□ 0.57
Ush1c-202ENSMUST00000078680 Foxp4Q9DBY0 795 aaKnown RBP18.59■□□□□ 0.57
Ush1c-202ENSMUST00000078680 Pibf1E9Q6K3 756 aa18.58■□□□□ 0.56
Ush1c-202ENSMUST00000078680 Tnpo1Q8BFY9 898 aaKnown RBP18.58■□□□□ 0.56
Ush1c-202ENSMUST00000078680 Aldh1l1Q8R0Y6 902 aa18.58■□□□□ 0.56
Ush1c-202ENSMUST00000078680 Klc3Q91W40 508 aa18.58■□□□□ 0.56
Ush1c-202ENSMUST00000078680 Nsd3Q6P2L6 1439 aa18.58■□□□□ 0.56
Ush1c-202ENSMUST00000078680 Sos2Q02384 1333 aa18.58■□□□□ 0.56
Ush1c-202ENSMUST00000078680 Hs1bp3Q3TC93 395 aa18.57■□□□□ 0.56
Ush1c-202ENSMUST00000078680 Rrp9Q91WM3 475 aaKnown RBP18.57■□□□□ 0.56
Ush1c-202ENSMUST00000078680 Col22a1E9Q7P1 1613 aa18.57■□□□□ 0.56
Ush1c-202ENSMUST00000078680 Efcab2Q9CQ46 164 aa18.57■□□□□ 0.56
Ush1c-202ENSMUST00000078680 Irx6Q9ER75 438 aa18.57■□□□□ 0.56
Ush1c-202ENSMUST00000078680 Shank3Q4ACU6 1730 aa18.56■□□□□ 0.56
Ush1c-202ENSMUST00000078680 Phlpp2Q8BXA7 1320 aa18.56■□□□□ 0.56
Ush1c-202ENSMUST00000078680 Myo5bP21271 1818 aa18.56■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 10 ms