RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Elp1Q7TT37 1333 aaKnown RBP17.2■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Pof1bQ8K4L4 587 aa17.19■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Mrvi1Q9WUX5 899 aaKnown RBP17.19■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Trim55G3X8Y1 545 aa17.19■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Mcm4P49717 862 aa17.19■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Cetn2Q9R1K9 172 aa17.19■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Rprd2Q6NXI6 1469 aaKnown RBP17.19■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 RalgapbQ8BQZ4 1484 aa17.19■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Fnbp4Q6ZQ03 1031 aa17.19■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Vps37dQ810I0 261 aa17.19■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Galntl5Q9D4M9 431 aa17.19■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Ripk4Q9ERK0 786 aa17.19■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Crocc2F6XLV1 1638 aa17.19■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Hoxb7P09024 217 aa17.18■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Hvcn1Q3U2S8 269 aa17.18■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Idi2Q8BFZ6 227 aa17.18■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Ccdc83Q9D4V3 305 aa17.18■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Gas2l3Q3UWW6 683 aa17.18■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Ccar2Q8VDP4 922 aaKnown RBP17.18■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 NapbP28663 298 aa17.18■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Rad23bP54728 416 aa17.18■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Ppp1r9bQ6R891 817 aaKnown RBP17.18■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Top2bQ64511 1612 aa17.18■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Wdhd1P59328 1117 aa17.17■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Tsg101Q61187 391 aa17.17■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Ccdc181Q80ZU5 509 aa17.17■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Lrrfip2Q91WK0 415 aa17.17■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Zmym3Q9JLM4 1370 aa17.17■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Pde4dQ01063 747 aa17.17■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 GpkowQ56A08 488 aa17.17■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 OvosQ3UU35 1456 aa17.16■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Q3UPC7 1272 aa17.16■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Igbp1bQ9QZ29 343 aa17.16■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Hmg20bQ9Z104 317 aa17.16■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Paxip1Q6NZQ4 1056 aa17.16■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Golim4Q8BXA1 655 aa17.16■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Kank1E9Q238 1360 aa17.16■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Pik3c2gO70167 1506 aa17.16■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Ccdc191J3QQ27 883 aa17.15■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Tspyl3Q3UYP3 334 aa17.15■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Bms1Q6PGF5 1284 aaKnown RBP17.15■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Kdm2bQ6P1G2 1309 aa17.15■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Olr1Q9EQ09 363 aa17.15■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Ankrd44B2RXR6 993 aa17.15■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Ampd3O08739 766 aa17.15■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Tmc2Q8R4P4 888 aa17.15■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Znf704Q9ERQ3 566 aa17.15■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Rcan3Q9JKK0 239 aa17.15■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Kdm3aQ6PCM1 1323 aa17.15■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Mybbp1aQ7TPV4 1344 aaKnown RBP17.15■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Jmjd4Q8BFT6 427 aa17.15■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 LarsQ8BMJ2 1178 aa17.15■□□□□ 0.34
Pcdh20-201ENSMUST00000061628 Tacc1Q6Y685 774 aa17.14■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Knop1Q9Z2Q2 478 aaKnown RBP17.14■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Traf3ip1Q149C2 625 aa17.14■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Nol11Q8BJW5 723 aaKnown RBP17.14■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Smarca5Q91ZW3 1051 aaKnown RBP17.14■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Neo1P97798 1493 aa17.14■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Tmem67Q8BR76 992 aa17.14■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Jade2Q6ZQF7 829 aa17.14■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Pdcl2Q78Y63 240 aa17.14■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Trim30cD3YVI9 513 aa17.13■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Naip5Q9R016 1403 aa17.13■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Slc5a1Q8C3K6 665 aa17.13■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Ssr1Q9CY50 286 aaKnown RBP17.13■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Cpa2Q504N0 417 aa17.13■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Slc12a5Q91V14 1138 aa17.13■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Lamc3Q9R0B6 1581 aa17.13■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Tnni2P13412 182 aa17.13■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Irf9Q61179 399 aa17.12■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Znf771Q8BJ90 317 aa17.12■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Atf7Q8R0S1 413 aa17.12■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 LyarQ08288 388 aaKnown RBP17.12■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Gnat3Q3V3I2 354 aa17.12■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Txndc16Q7TN22 820 aa17.12■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Klf15Q9EPW2 415 aa17.12■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 PrkcshO08795 521 aa17.12■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Stx1aO35526 288 aa17.12■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Arglu1Q3UL36 271 aaKnown RBP17.11■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Luzp1Q8R4U7 1068 aaKnown RBP17.11■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Fam50bQ9WTJ8 334 aa17.11■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Gapvd1Q6PAR5 1458 aa17.11■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Zkscan7E9PVW1 718 aa17.11■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Ncapg2Q6DFV1 1138 aa17.11■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Cdan1Q8CC12 1239 aa17.11■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Ttc5Q99LG4 440 aa17.11■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Erich4Q3UNU4 136 aa17.11■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Ankle2Q6P1H6 964 aa17.11■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Api5O35841 504 aaKnown RBP17.1■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 EappQ5BU09 281 aa17.1■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Secisbp2lQ6A098 1086 aaKnown RBP17.1■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Nup133Q8R0G9 1155 aa17.1■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Atxn3Q9CVD2 355 aa17.1■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Stx6Q9JKK1 255 aa17.1■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Wdr63B2RY71 923 aa17.1■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Tbc1d9Q3UYK3 1264 aa17.1■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Gm10563F6WIE4 79 aa17.1■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Soga3Q6NZL0 945 aa17.1■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 LlphQ9D945 130 aaKnown RBP17.1■□□□□ 0.33
Pcdh20-201ENSMUST00000061628 Ube2hP62257 183 aa17.09■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 46.7 ms