RNA–Protein interactions for RNA: ENSMUST00000054588.14

Col9a1-201, Transcript of Collagen alpha-1(IX) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col9a1, Length 3,834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-201ENSMUST00000054588 Speer4bQ9D9F7 267 aa13.09□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Fmnl2A2APV2 1086 aa13.08□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Hoxa7P02830 229 aa13.08□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Pdia3P27773 505 aaKnown RBP13.08□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Eya1P97767 591 aa13.08□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Btbd11Q6GQW0 1109 aa13.08□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Erc2Q6PH08 957 aa13.08□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Slc35g1Q8BY79 368 aa13.08□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Sirt1Q923E4 737 aa13.08□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Frmpd2A0A140LI67 1392 aa13.08□□□□□ -0.32
Col9a1-201ENSMUST00000054588 PogkQ80TC5 607 aa13.07□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Tshz3Q8CGV9 1081 aa13.07□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Iffo2Q8R2V2 512 aa13.07□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Dnajc10Q9DC23 793 aa13.07□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Bcar3Q9QZK2 820 aa13.07□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Zkscan2G3X952 960 aa13.07□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Gnai2P08752 355 aaKnown RBP13.07□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Gsdma3Q5Y4Y6 464 aa13.07□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Q8C5K5 320 aa13.07□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Znf335A2A5K6 1337 aa13.06□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Gm21680A0A0G2JGR8 267 aa13.06□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Zbtb45Q52KG4 520 aa13.06□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Jakmip1Q8BVL9 626 aa13.06□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Nphp1Q9QY53 687 aa13.06□□□□□ -0.32
Col9a1-201ENSMUST00000054588 HdgfP51859 237 aaKnown RBP13.06□□□□□ -0.32
Col9a1-201ENSMUST00000054588 ImpactO55091 318 aa13.06□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Atp6v1dP57746 247 aa13.05□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Nol8Q3UHX0 1147 aaKnown RBP13.05□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Nol10Q5RJG1 687 aaKnown RBP13.05□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Mrps27Q8BK72 415 aaKnown RBP13.05□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Ppp1r42Q8R1Z4 357 aa13.05□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Bloc1s4Q8VED2 215 aa13.05□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Zap70P43404 618 aa13.05□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Paxip1Q6NZQ4 1056 aa13.05□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Casc1Q6TDU8 730 aa13.05□□□□□ -0.32
Col9a1-201ENSMUST00000054588 EngaseQ8BX80 734 aa13.05□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Gm21663A0A0G2JE01 267 aa13.04□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Gm7361D3Z6R1 267 aa13.04□□□□□ -0.32
Col9a1-201ENSMUST00000054588 5031410I06RikE9Q4E0 267 aa13.04□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Gm1979E9QAN3 267 aa13.04□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Gm5862K7N5V5 267 aa13.04□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Gm10220K7N660 267 aa13.04□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Glipr1l2Q9CQ35 332 aa13.04□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Ercc6l2Q9JIM3 1537 aa13.04□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Ppfia3P60469 1194 aa13.04□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Tmx3Q8BXZ1 456 aa13.04□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Cps1Q8C196 1500 aa13.03□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Smarce1O54941 411 aaKnown RBP13.03□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Cpa2Q504N0 417 aa13.03□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Dzip1Q8BMD2 852 aa13.03□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Kif20bQ80WE4 1774 aaKnown RBP13.03□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Rasa1E9PYG6 1038 aa13.02□□□□□ -0.32
Col9a1-201ENSMUST00000054588 Atg4a-psA0A0G2JFS9 396 aa13.02□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Zpr1Q62384 459 aa13.02□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Atg4aQ8C9S8 396 aa13.02□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Cyp27a1Q9DBG1 533 aa13.02□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Dixdc1Q80Y83 711 aa13.02□□□□□ -0.33
Col9a1-201ENSMUST00000054588 AnlnQ8K298 1121 aaKnown RBP13.02□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Igflr1Q3U4N7 345 aa13.01□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Filip1lQ6P6L0 1131 aa13.01□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Rnf214Q8BFU3 668 aaKnown RBP13.01□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Nlgn1Q99K10 843 aa13.01□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Mical1Q8VDP3 1048 aa13.01□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Kcnn1Q9EQR3 537 aa13.01□□□□□ -0.33
Col9a1-201ENSMUST00000054588 CemipQ8BI06 1361 aa13.01□□□□□ -0.33
Col9a1-201ENSMUST00000054588 PzpQ61838 1495 aa13□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Polr3gQ6NXY9 223 aa13□□□□□ -0.33
Col9a1-201ENSMUST00000054588 St18Q80TY4 1045 aa13□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Cdk12Q14AX6 1484 aaKnown RBP13□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Usp48Q3V0C5 1052 aa13□□□□□ -0.33
Col9a1-201ENSMUST00000054588 NexnQ7TPW1 607 aa13□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Slc39a6Q8C145 765 aa12.99□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Ptpdc1Q6NZK8 747 aa12.99□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Dmrtc1Q9D9R7 182 aa12.99□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Noc3lQ8VI84 807 aaKnown RBP12.99□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Sytl4Q9R0Q1 673 aa12.99□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Igsf1Q7TQA1 1317 aa12.98□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Phf23Q8BSN5 401 aa12.98□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Mdc1Q5PSV9 1707 aa12.98□□□□□ -0.33
Col9a1-201ENSMUST00000054588 4930407I10RikD3Z5T8 1512 aa12.98□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Pa2g4P50580 394 aaKnown RBP12.98□□□□□ -0.33
Col9a1-201ENSMUST00000054588 LlphQ9D945 130 aaKnown RBP12.98□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Anapc15P60007 132 aa12.98□□□□□ -0.33
Col9a1-201ENSMUST00000054588 KinQ8K339 391 aa12.98□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Tnrc6bQ8BKI2 1810 aaKnown RBP12.98□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Dip2bQ3UH60 1574 aa12.97□□□□□ -0.33
Col9a1-201ENSMUST00000054588 F2rP30558 430 aa12.97□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Fez1Q8K0X8 392 aa12.97□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Farp2Q91VS8 1065 aa12.97□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Zkscan16A2ALW2 728 aa12.97□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Rad17Q6NXW6 688 aa12.97□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Rnf123Q5XPI3 1314 aa12.97□□□□□ -0.33
Col9a1-201ENSMUST00000054588 RictorQ6QI06 1708 aa12.97□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Ttc19Q8CC21 365 aa12.97□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Gimap6Q8K349 305 aa12.97□□□□□ -0.33
Col9a1-201ENSMUST00000054588 4931400O07RikQ9D4M5 137 aa12.97□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Mad1l1Q9WTX8 717 aaKnown RBP12.97□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Chd4Q6PDQ2 1915 aaKnown RBP12.96□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Kif4P33174 1231 aa12.96□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Ush1cQ9ES64 910 aa12.96□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms