RNA–Protein interactions for RNA: ENSMUST00000035911.4

Rc3h1-201, Transcript of Roquin-1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Rc3h1, Length 3,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-201ENSMUST00000035911 Smarca5Q91ZW3 1051 aaKnown RBP6.77□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 NhsB1AV60 1647 aa6.76□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Adcy10Q8C0T9 1614 aa6.76□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Cavin4A2AMM0 362 aa6.76□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Fan1Q69ZT1 1020 aa6.76□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Zscan22Q8BGS5 496 aa6.76□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Pnpla2Q8BJ56 486 aa6.76□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Nup88Q8CEC0 753 aaKnown RBP6.76□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Ciz1Q8VEH2 845 aa6.76□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Smc3Q9CW03 1217 aaKnown RBP6.76□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Cyp46a1Q9WVK8 500 aa6.76□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Ttc21aQ8C0S4 1314 aa6.76□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Caskin1Q6P9K8 1431 aa6.76□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Atp7aQ64430 1491 aa6.76□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 MycnP03966 462 aaKnown RBP6.76□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 EappQ5BU09 281 aa6.76□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Tpm4Q6IRU2 248 aa6.76□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Vps33aQ9D2N9 598 aa6.76□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Irx5Q9JKQ4 484 aa6.76□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Sh3bgrQ9WUZ7 214 aa6.76□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Usp48Q3V0C5 1052 aa6.75□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Nol10Q5RJG1 687 aaKnown RBP6.75□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Tbc1d30Q69ZT9 766 aa6.75□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Nap1l3Q794H2 544 aa6.75□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Odf2lQ9D478 642 aa6.75□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 MycbpQ9EQS3 103 aa6.75□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 PtprgQ05909 1442 aa6.75□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Atp10dQ8K2X1 1416 aa6.75□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Stag3O70576 1240 aa6.75□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Wdr93Q402B2 695 aa6.75□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Tmx4Q8C0L0 335 aa6.75□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Spata32Q8C5V0 334 aa6.75□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 TnmdQ9EP64 317 aa6.75□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 CenpjQ569L8 1344 aa6.75□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Wdr33Q8K4P0 1330 aaKnown RBP6.75□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 IbtkQ6ZPR6 1352 aaKnown RBP6.75□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Prex2Q3LAC4 1598 aa6.75□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Cfap58B2RW38 873 aa6.75□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Ranbp1P34022 203 aaKnown RBP6.75□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Ice2Q3UZ18 988 aaKnown RBP6.75□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Ddx19aQ61655 478 aaKnown RBP6.75□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 TfrcQ62351 763 aaKnown RBP6.75□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Ccz1Q8C1Y8 480 aa6.75□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Bicd2Q921C5 820 aa6.75□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Stx6Q9JKK1 255 aa6.75□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 EcsitQ9QZH6 435 aa6.75□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Myo1cQ9WTI7 1063 aa6.75□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Znf608Q56A10 1511 aa6.75□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Cdc42bpaQ3UU96 1719 aa6.74□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Kif3cO35066 796 aa6.74□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Cdk4P30285 303 aa6.74□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Mcm6P97311 821 aa6.74□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Skap1Q3UUV5 355 aa6.74□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Ints3Q7TPD0 1041 aaKnown RBP6.74□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Jakmip1Q8BVL9 626 aa6.74□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Tyro3P55144 880 aa6.74□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Strn4P58404 760 aa6.74□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Ccdc102aQ3TMW1 549 aa6.74□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Map9Q3TRR0 646 aa6.74□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Ap5z1Q3U829 807 aa6.74□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Ric3Q8BPM6 367 aa6.74□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Dnaaf4Q8R368 420 aa6.74□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 AatkQ80YE4 1365 aa6.74□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Btn2a2A4QPC6 514 aa6.74□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Mctp1E9PV86 951 aa6.74□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Chrm1P12657 460 aa6.74□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Cnnm3Q32NY4 713 aa6.74□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Lrrc9Q8CDN9 1456 aa6.74□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Creld2Q9CYA0 350 aa6.74□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Styxl1Q9DAR2 321 aa6.74□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Fam208aQ69ZR9 1610 aaKnown RBP6.73□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Mum1Q6DID5 682 aa6.73□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 OptnQ8K3K8 584 aa6.73□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 DonsonQ9QXP4 560 aa6.73□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Add3Q9QYB5 706 aaKnown RBP6.73□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 AnkarA2RT91 1465 aa6.73□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Ankrd50F7BE84 1390 aa6.73□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Zkscan2G3X952 960 aa6.73□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Tshz3Q8CGV9 1081 aa6.73□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Rab11fip3Q8CHD8 1047 aa6.73□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 P2rx7Q9Z1M0 595 aa6.73□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 NinlQ6ZQ12 1394 aa6.73□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Wdr3Q8BHB4 942 aaKnown RBP6.73□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Fam53cQ8BXQ8 393 aa6.73□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Wdr24Q8CFJ9 790 aa6.73□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Pof1bQ8K4L4 587 aa6.73□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Elf2Q9JHC9 593 aa6.73□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Stk3Q9JI10 497 aa6.73□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Chaf1aQ9QWF0 911 aa6.73□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Hmox1P14901 289 aa6.72□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 CalcaP70160 136 aa6.72□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Uri1Q3TLD5 531 aa6.72□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Znf532Q6NXK2 1036 aa6.72□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Trak2Q6P9N8 913 aa6.72□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Adck5Q80V03 582 aa6.72□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Stk24Q99KH8 431 aa6.72□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Snw1Q9CSN1 536 aaKnown RBP6.72□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Nfe2l3Q9WTM4 660 aa6.72□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Trpm2Q91YD4 1506 aa6.72□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Abca8bQ8K440 1620 aa6.72□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 10.3 ms