RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Plxnc1Q9QZC2 1574 aa12.73□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Nphp4P59240 1425 aa12.73□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Zbtb21E9Q444 1094 aa12.73□□□□□ -0.37
Rnf40-201ENSMUST00000033088 CltcQ68FD5 1675 aaKnown RBP12.72□□□□□ -0.37
Rnf40-201ENSMUST00000033088 ImpactO55091 318 aa12.72□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Trim30cD3YVI9 513 aa12.72□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Secisbp2lQ6A098 1086 aaKnown RBP12.72□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Txndc2Q6P902 515 aa12.72□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Pola1P33609 1465 aa12.72□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Nol8Q3UHX0 1147 aaKnown RBP12.72□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Zbtb45Q52KG4 520 aa12.72□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Zbtb3Q91X45 518 aa12.72□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Zscan25B2RX31 543 aa12.71□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Zkscan2G3X952 960 aa12.71□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Serpinb6bO08804 377 aa12.71□□□□□ -0.37
Rnf40-201ENSMUST00000033088 NefhP19246 1090 aa12.71□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Gabpb2P81069 414 aa12.71□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Sbno1Q689Z5 1390 aa12.71□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Ptpdc1Q6NZK8 747 aa12.71□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Q9D9S1 216 aa12.71□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Prrc2bQ7TPM1 1486 aaKnown RBP12.71□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Jarid2Q62315 1234 aa12.7□□□□□ -0.38
Rnf40-201ENSMUST00000033088 MvpQ9EQK5 861 aa12.7□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Nphp1Q9QY53 687 aa12.7□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Cdk5rap2Q8K389 1822 aa12.7□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Sh3bp1P55194 680 aa12.7□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Ints3Q7TPD0 1041 aaKnown RBP12.7□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Nup88Q8CEC0 753 aaKnown RBP12.69□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Ccdc94Q9D6J3 314 aa12.69□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Fkbp4P30416 458 aa12.69□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Gjb2Q00977 226 aa12.69□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Bms1Q6PGF5 1284 aaKnown RBP12.69□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Ercc3P49135 783 aa12.69□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Ccdc102aQ3TMW1 549 aa12.69□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Slx4ipQ9D7Y9 413 aa12.69□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Arhgap23Q69ZH9 1483 aa12.68□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Gm10093D3YYI8 482 aa12.68□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Hdac1O09106 482 aaKnown RBP12.68□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Pde1cQ64338 706 aa12.68□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Mphosph10Q810V0 681 aaKnown RBP12.68□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Slc12a5Q91V14 1138 aa12.68□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Cnpy2Q9QXT0 182 aa12.68□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Pmfbp1Q9WVQ0 1022 aa12.68□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Itsn2Q9Z0R6 1659 aa12.68□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Mns1Q61884 491 aa12.68□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Larp6Q8BN59 492 aa12.68□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Ncbp3Q8BZR9 615 aaKnown RBP12.68□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Brd1E9PZ26 1189 aaKnown RBP12.68□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Cfap73J3QPZ5 306 aa12.68□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Zfp251Q6PCX8 632 aa12.68□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Nop14Q8R3N1 860 aaKnown RBP12.68□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Rbm42Q91V81 474 aaKnown RBP12.67□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Exoc6bA6H5Z3 810 aa12.67□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Rab11fip3Q8CHD8 1047 aa12.67□□□□□ -0.38
Rnf40-201ENSMUST00000033088 RictorQ6QI06 1708 aa12.67□□□□□ -0.38
Rnf40-201ENSMUST00000033088 DnmbpQ6TXD4 1580 aa12.67□□□□□ -0.38
Rnf40-201ENSMUST00000033088 PalldQ9ET54 1408 aa12.67□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Psme1P97371 249 aa12.67□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Aifm3Q3TY86 605 aa12.67□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Mindy4Q3UQI9 744 aa12.67□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Prune1Q8BIW1 454 aa12.67□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Aldh1l1Q8R0Y6 902 aa12.67□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Vps18Q8R307 973 aa12.67□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Antxr1Q9CZ52 562 aa12.67□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Gm21190A0A0G2JGJ6 266 aa12.66□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Ptgs1P22437 602 aa12.66□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Kiaa0753Q6A000 959 aa12.66□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Rec8Q8C5S7 591 aa12.66□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Lrrc7Q80TE7 1490 aa12.66□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Grpel1Q99LP6 217 aa12.66□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Hmgn5Q9JL35 406 aa12.66□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Pdia3P27773 505 aaKnown RBP12.66□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Mcm6P97311 821 aa12.66□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Gtf2f1Q3THK3 508 aaKnown RBP12.66□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Tmco3Q8BH01 678 aa12.66□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Ccdc178Q8CDV0 866 aa12.66□□□□□ -0.38
Rnf40-201ENSMUST00000033088 MyclP10166 368 aa12.65□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Gas2l3Q3UWW6 683 aa12.65□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Trim27Q62158 513 aa12.65□□□□□ -0.38
Rnf40-201ENSMUST00000033088 AnlnQ8K298 1121 aaKnown RBP12.65□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Mrps25Q9D125 171 aaKnown RBP12.65□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Cplx1P63040 134 aa12.65□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Gnl2Q99LH1 728 aaKnown RBP12.65□□□□□ -0.38
Rnf40-201ENSMUST00000033088 PdcQ9QW08 244 aa12.65□□□□□ -0.38
Rnf40-201ENSMUST00000033088 Tubgcp6G5E8P0 1769 aa12.65□□□□□ -0.38
Rnf40-201ENSMUST00000033088 ItpripQ3TNL8 555 aa12.65□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Dnajc5gQ8C632 165 aa12.65□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Ppp1r42Q8R1Z4 357 aa12.65□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Naip7Q9JIB3 1402 aa12.64□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Tpm3-rs7D3Z2H9 248 aa12.64□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Tpm3P21107 285 aaKnown RBP12.64□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Gpatch3Q8BIY1 525 aa12.64□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Gcc1Q9D4H2 778 aa12.64□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Zkscan7E9PVW1 718 aa12.64□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Gnai2P08752 355 aaKnown RBP12.64□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Lamb3Q61087 1168 aa12.64□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Rnf187Q8BFX1 236 aa12.64□□□□□ -0.39
Rnf40-201ENSMUST00000033088 PtprmP28828 1452 aa12.64□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Sipa1l1Q8C0T5 1782 aa12.64□□□□□ -0.39
Rnf40-201ENSMUST00000033088 Gm9992B2RWK3 458 aa12.63□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms