RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 CenppQ9CZ92 286 aa13.06□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Mdc1Q5PSV9 1707 aa13.06□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Casq1O09165 405 aa13.06□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Hsp90b1P08113 802 aaKnown RBP13.06□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Cwc27Q3TKY6 469 aa13.06□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Gtpbp6Q3U6U5 514 aa13.05□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Ap3b2Q9JME5 1082 aa13.05□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 FancaQ9JL70 1439 aa13.05□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Astn2Q80Z10 1352 aa13.05□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Tm6sf1P58749 370 aa13.05□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Cavin2Q63918 418 aaKnown RBP13.05□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Aldh8a1Q8BH00 487 aa13.05□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Ppp1r42Q8R1Z4 357 aa13.05□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Spef2Q8C9J3 1734 aa13.05□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Phactr2B1AVP0 632 aa13.04□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Nucb1Q02819 459 aaKnown RBP13.04□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Gcc1Q9D4H2 778 aa13.04□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Als2Q920R0 1651 aa13.04□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 MpndQ3TV65 487 aa13.04□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 EngaseQ8BX80 734 aa13.04□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Chpf2Q3UU43 768 aa13.04□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Gdpd2Q9ESM6 539 aa13.04□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 C5P06684 1680 aa13.04□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Abcc10Q8R4P9 1501 aa13.03□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Rasa1E9PYG6 1038 aa13.03□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Zhx1P70121 873 aa13.03□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Map3k13Q1HKZ5 959 aa13.03□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Topaz1E5FYH1 1653 aa13.03□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Nol12Q8BG17 217 aa13.03□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Tmem94Q7TSH8 1360 aa13.03□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Brwd3A2AHJ4 1799 aa13.02□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Ddrgk1Q80WW9 315 aa13.02□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 CemipQ8BI06 1361 aa13.02□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Kiaa1211Q5PR69 1207 aa13.02□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Cyp2d12Q8BVD2 504 aa13.02□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Bag4Q8CI61 457 aa13.02□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Amotl2Q8K371 772 aa13.02□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Erbb4Q61527 1308 aa13.02□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Gnai2P08752 355 aaKnown RBP13.02□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 MlecQ6ZQI3 291 aaKnown RBP13.02□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Nphp1Q9QY53 687 aa13.02□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Chrm1P12657 460 aa13.01□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Slc4a10Q5DTL9 1118 aa13.01□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 1700010I14RikQ7TPG0 532 aa13.01□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Cpa2Q504N0 417 aa13.01□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Aldh1l2Q8K009 923 aa13.01□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Frmpd2A0A140LI67 1392 aa13.01□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Mon2Q80TL7 1715 aa13.01□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Kiaa0753Q6A000 959 aa13□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Stk3Q9JI10 497 aa13□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Fkbp4P30416 458 aa13□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Ptpdc1Q6NZK8 747 aa13□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Pik3c2aQ61194 1686 aa13□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Kdm4cQ8VCD7 1054 aa12.99□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 RestQ8VIG1 1082 aa12.99□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Med1Q925J9 1575 aa12.99□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Anapc15-psA0A140T8L6 141 aa12.99□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Exoc6bA6H5Z3 810 aa12.99□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Erc2Q6PH08 957 aa12.99□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Cdk12Q14AX6 1484 aaKnown RBP12.99□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 NalcnQ8BXR5 1738 aa12.99□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Zkscan16A2ALW2 728 aa12.99□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Hoxc9P09633 260 aa12.99□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Gse1Q3U3C9 1213 aa12.99□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Cyp27a1Q9DBG1 533 aa12.99□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Zbtb45Q52KG4 520 aa12.98□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Trim44Q9QXA7 346 aa12.98□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Rims2Q9EQZ7 1530 aa12.98□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 PtmaP26350 111 aa12.98□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Mcm2P97310 904 aa12.98□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Ubr1O70481 1757 aa12.97□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Col16a1Q8BLX7 1580 aa12.97□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 HypkQ9CR41 129 aa12.97□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Zap70P43404 618 aa12.97□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Arhgef1Q61210 920 aaKnown RBP12.97□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Jakmip1Q8BVL9 626 aa12.97□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Tpx2A2APB8 745 aaKnown RBP12.96□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Gadd45bP22339 160 aa12.96□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Zkscan1Q8BGS3 561 aaKnown RBP12.96□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Rimbp3Q3V0F0 1606 aa12.96□□□□□ -0.33
Ptcd1-201ENSMUST00000031628 Tlr7P58681 1050 aa12.96□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Erich6bQ9D4S6 220 aa12.96□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Camta1A2A891 1682 aa12.96□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 C3P01027 1663 aa12.96□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Map2P20357 1828 aa12.95□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Cyp2d11P24457 504 aa12.95□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Jarid2Q62315 1234 aa12.95□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Zkscan2G3X952 960 aa12.95□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Cfdp1O88271 295 aaKnown RBP12.95□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Thsd7aQ69ZU6 1645 aa12.95□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Tns3Q5SSZ5 1440 aa12.95□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Dhx16G3X8X0 1044 aaKnown RBP12.94□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Zdhhc9P59268 364 aa12.94□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Phf23Q8BSN5 401 aa12.94□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Sytl4Q9R0Q1 673 aa12.94□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Mmp8O70138 465 aa12.94□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 F2rP30558 430 aa12.94□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 VgfQ0VGU4 617 aa12.94□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Rnf214Q8BFU3 668 aaKnown RBP12.94□□□□□ -0.34
Ptcd1-201ENSMUST00000031628 Disp3A3KFU9 1347 aa12.94□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 102.5 ms