RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 Ccnl1Q52KE7 532 aaKnown RBP9.65□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Stk3Q9JI10 497 aa9.65□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 CalcaP70160 136 aa9.65□□□□□ -0.86
Ccdc39-201ENSMUST00000029222 Med1Q925J9 1575 aa9.65□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Uhrf1bp1B2KF50 1429 aa9.65□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Ift172Q6VH22 1749 aa9.64□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Rfx1P48377 963 aa9.64□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Rad17Q6NXW6 688 aa9.64□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Parp14Q2EMV9 1817 aa9.64□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Spryd3E9Q9B3 442 aa9.64□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Efcab2Q9CQ46 164 aa9.64□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Hspa2P17156 633 aa9.64□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Eno4Q8C042 619 aa9.64□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Q8C5K5 320 aa9.64□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Irf9Q61179 399 aa9.63□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 SympkQ80X82 1284 aa9.63□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Tnpo1Q8BFY9 898 aaKnown RBP9.63□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Slc5a4bQ91ZP4 660 aa9.63□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Echdc1Q9D9V3 322 aa9.63□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Bcar3Q9QZK2 820 aa9.63□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Kdm6aO70546 1401 aa9.63□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 MarsQ68FL6 902 aaKnown RBP9.63□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Psrc1Q9D0P7 329 aa9.63□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Znf521Q6KAS7 1311 aa9.63□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Nol10Q5RJG1 687 aaKnown RBP9.62□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Flad1Q8R123 492 aa9.62□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Tfip11Q9ERA6 838 aaKnown RBP9.62□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Taf7Q9R1C0 341 aa9.62□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 C3P01027 1663 aa9.62□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Atf5O70191 283 aa9.62□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 DekQ7TNV0 380 aaKnown RBP9.62□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Lmbr1lQ9D1E5 489 aa9.62□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Atp7bQ64446 1462 aa9.62□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Usp32F8VPZ3 1604 aa9.62□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Brd1E9PZ26 1189 aaKnown RBP9.62□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Pa2g4P50580 394 aaKnown RBP9.62□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Igflr1Q3U4N7 345 aa9.62□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Wwc1Q5SXA9 1104 aa9.62□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Ankib1Q6ZPS6 1085 aa9.62□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Elp1Q7TT37 1333 aaKnown RBP9.62□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Disp3A3KFU9 1347 aa9.61□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Tnrc6bQ8BKI2 1810 aaKnown RBP9.61□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Nkx2-3P97334 362 aa9.61□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Soga3Q6NZL0 945 aa9.61□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Bicc1Q99MQ1 977 aaKnown RBP9.61□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Gcc1Q9D4H2 778 aa9.61□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Wdr63B2RY71 923 aa9.61□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Exoc5Q3TPX4 708 aa9.61□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Ttc19Q8CC21 365 aa9.61□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Zeb2Q9R0G7 1215 aa9.61□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Ttll7A4Q9F0 912 aa9.6□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Fkbp5Q64378 456 aa9.6□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Cdhr2E9Q7P9 1308 aa9.6□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Strn4P58404 760 aa9.6□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Col15a1O35206 1367 aa9.6□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Topaz1E5FYH1 1653 aa9.6□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Phlpp2Q8BXA7 1320 aa9.6□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Rabep1O35551 862 aa9.6□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Tbc1d9Q3UYK3 1264 aa9.6□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 GpkowQ56A08 488 aa9.6□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Zbtb45Q52KG4 520 aa9.59□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Ptpdc1Q6NZK8 747 aa9.59□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Plcb2A3KGF7 1181 aa9.59□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Tlr7P58681 1050 aa9.59□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Adam1aQ60813 791 aa9.59□□□□□ -0.87
Ccdc39-201ENSMUST00000029222 Bicdl1A0JNT9 577 aa9.58□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Cnksr1A2A9K7 700 aa9.58□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 MecomP14404 1042 aa9.58□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Hs1bp3Q3TC93 395 aa9.58□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Aldh1l2Q8K009 923 aa9.58□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Nid2O88322 1403 aa9.58□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Ythdc1E9Q5K9 736 aaKnown RBP9.58□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Zkscan2G3X952 960 aa9.58□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 LifrP42703 1092 aa9.58□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Atp8b2P98199 1209 aa9.58□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 CoilQ5SU73 570 aa9.58□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Stard3nlQ9DCI3 235 aa9.58□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Phactr2B1AVP0 632 aa9.57□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Mcm2P97310 904 aa9.57□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Edc3Q8K2D3 508 aaKnown RBP9.57□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 NmiO35309 314 aa9.57□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Nip7Q9CXK8 180 aaKnown RBP9.57□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Col14a1Q80X19 1797 aa9.57□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Nrxn3Q6P9K9 1571 aa9.57□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Aox2Q5SGK3 1345 aa9.57□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Atg4a-psA0A0G2JFS9 396 aa9.57□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Ier5O89113 308 aa9.57□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Nkx1-2P42580 305 aa9.57□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Grm8P47743 908 aa9.57□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Nol8Q3UHX0 1147 aaKnown RBP9.57□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Atg4aQ8C9S8 396 aa9.57□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Smc4Q8CG47 1286 aa9.57□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Rassf8Q8CJ96 419 aa9.57□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Cyp2d11P24457 504 aa9.56□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Col1a2Q01149 1372 aa9.56□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Igsf1Q7TQA1 1317 aa9.56□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Tm6sf1P58749 370 aa9.56□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Scaf1Q5U4C3 1256 aaKnown RBP9.56□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Sugp2Q8CH09 1067 aa9.56□□□□□ -0.88
Ccdc39-201ENSMUST00000029222 Slc26a8Q8R0C3 999 aa9.56□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms