RNA–Protein interactions for RNA: ENSMUST00000023154.2

Cldn1-201, Transcript of Claudin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldn1, Length 3,247 nt, Biotype protein coding, Subcellular localisation Tight Junction .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1-201ENSMUST00000023154 Ccdc146E9Q9F7 977 aa11.41□□□□□ -0.58
Cldn1-201ENSMUST00000023154 CrklP47941 303 aa11.4□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Btbd11Q6GQW0 1109 aa11.4□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Ccdc155Q80VJ8 648 aa11.4□□□□□ -0.58
Cldn1-201ENSMUST00000023154 Cetn4Q8K4K1 168 aa11.39□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Col1a2Q01149 1372 aa11.39□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Fkbp4P30416 458 aa11.39□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Eif4g2Q62448 906 aaKnown RBP11.39□□□□□ -0.59
Cldn1-201ENSMUST00000023154 FocadA2AKG8 1798 aa11.39□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Tnks1bp1P58871 1720 aa11.39□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Bcl2l13P59017 434 aa11.39□□□□□ -0.59
Cldn1-201ENSMUST00000023154 CoilQ5SU73 570 aa11.39□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Tnpo1Q8BFY9 898 aaKnown RBP11.39□□□□□ -0.59
Cldn1-201ENSMUST00000023154 HnrnpuQ8VEK3 800 aaKnown RBP11.39□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Pdzd9Q9D9M4 266 aa11.39□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Zfp142G5E869 1843 aa11.39□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Aldh8a1Q8BH00 487 aa11.38□□□□□ -0.59
Cldn1-201ENSMUST00000023154 KnstrnQ9D9Z1 312 aaKnown RBP11.38□□□□□ -0.59
Cldn1-201ENSMUST00000023154 BcorQ8CGN4 1759 aa11.38□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Sptbn5F6UCX4 1208 aa11.38□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Card10P58660 1021 aa11.38□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Atp10bB1AWN4 1474 aa11.38□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Atg4a-psA0A0G2JFS9 396 aa11.37□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Tbc1d9Q3UYK3 1264 aa11.37□□□□□ -0.59
Cldn1-201ENSMUST00000023154 ThemisQ8BGW0 636 aa11.37□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Atg4aQ8C9S8 396 aa11.37□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Rabep1O35551 862 aa11.37□□□□□ -0.59
Cldn1-201ENSMUST00000023154 TkfcQ8VC30 578 aa11.37□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Cnksr1A2A9K7 700 aa11.37□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Brinp3Q499E0 766 aa11.37□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Zranb3Q6NZP1 1069 aa11.37□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Fam50bQ9WTJ8 334 aa11.37□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Nek4Q9Z1J2 792 aa11.37□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Gnai2P08752 355 aaKnown RBP11.36□□□□□ -0.59
Cldn1-201ENSMUST00000023154 RgmbQ7TQ33 436 aa11.36□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Tns2Q8CGB6 1400 aa11.35□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Srgap3Q812A2 1099 aa11.35□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Ppp1r42Q8R1Z4 357 aa11.35□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Txnrd1Q9JMH6 613 aa11.35□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Bcl9lQ67FY2 1494 aa11.35□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Adcy9P51830 1353 aa11.35□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Mre11Q61216 706 aa11.35□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Exoc6bA6H5Z3 810 aa11.34□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Cgnl1Q6AW69 1298 aa11.34□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Gcc1Q9D4H2 778 aa11.34□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Phkg2Q9DB30 406 aa11.34□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Zap70P43404 618 aa11.34□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Igfbp6P47880 238 aa11.34□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Tlr7P58681 1050 aa11.34□□□□□ -0.59
Cldn1-201ENSMUST00000023154 GckrQ91X44 587 aa11.34□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Slit1Q80TR4 1531 aa11.34□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Pdia6Q922R8 440 aaKnown RBP11.33□□□□□ -0.59
Cldn1-201ENSMUST00000023154 Cwc27Q3TKY6 469 aa11.33□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Stk36Q69ZM6 1316 aa11.33□□□□□ -0.6
Cldn1-201ENSMUST00000023154 CalcaP70160 136 aa11.33□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Bend3Q6PAL0 825 aa11.33□□□□□ -0.6
Cldn1-201ENSMUST00000023154 GorabQ8BRM2 368 aa11.33□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Acsbg1Q99PU5 721 aa11.33□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Ubr2Q6WKZ8 1755 aa11.33□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Mmp8O70138 465 aa11.32□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Atp8b2P98199 1209 aa11.32□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Larp1Q6ZQ58 1072 aaKnown RBP11.32□□□□□ -0.6
Cldn1-201ENSMUST00000023154 DccP70211 1447 aa11.32□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Map3k13Q1HKZ5 959 aa11.32□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Echdc1Q9D9V3 322 aa11.32□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Tfip11Q9ERA6 838 aaKnown RBP11.32□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Nphp1Q9QY53 687 aa11.32□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Bcar3Q9QZK2 820 aa11.32□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Asic4Q7TNS7 539 aa11.31□□□□□ -0.6
Cldn1-201ENSMUST00000023154 CenppQ9CZ92 286 aa11.31□□□□□ -0.6
Cldn1-201ENSMUST00000023154 SympkQ80X82 1284 aa11.31□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Smim5Q8BT42 78 aa11.31□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Cyp46a1Q9WVK8 500 aa11.31□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Chmp7Q8R1T1 451 aa11.31□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Flt4P35917 1363 aa11.31□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Tjp1P39447 1745 aaKnown RBP11.31□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Map3k2Q61083 619 aa11.3□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Mphosph10Q810V0 681 aaKnown RBP11.3□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Tmem119Q8R138 280 aa11.3□□□□□ -0.6
Cldn1-201ENSMUST00000023154 PigbQ9JJQ0 542 aa11.3□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Hspa2P17156 633 aa11.3□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Pdia3P27773 505 aaKnown RBP11.3□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Mcm2P97310 904 aa11.3□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Ppp6r3Q922D4 844 aa11.3□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Taf7Q9R1C0 341 aa11.3□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Cfdp1O88271 295 aaKnown RBP11.29□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Ier5O89113 308 aa11.29□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Col4a1P02463 1669 aa11.29□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Catsper2A2ARP9 588 aa11.28□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Iqsec3Q3TES0 1195 aa11.28□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Gm10093D3YYI8 482 aa11.28□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Spryd3E9Q9B3 442 aa11.28□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Hdac1O09106 482 aaKnown RBP11.28□□□□□ -0.6
Cldn1-201ENSMUST00000023154 PsapQ61207 557 aaKnown RBP11.28□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Prkab2Q6PAM0 271 aa11.28□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Prune1Q8BIW1 454 aa11.28□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Ttll7A4Q9F0 912 aa11.28□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Tgfb1i1Q62219 461 aa11.28□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Speer4bQ9D9F7 267 aa11.28□□□□□ -0.6
Cldn1-201ENSMUST00000023154 Mcmdc2E9Q956 681 aa11.27□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms