RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Cwc27Q3TKY6 469 aa18.46■□□□□ 0.55
Nkx3-1-201ENSMUST00000022646 Ptpdc1Q6NZK8 747 aa18.46■□□□□ 0.55
Nkx3-1-201ENSMUST00000022646 Zkscan1Q8BGS3 561 aaKnown RBP18.46■□□□□ 0.55
Nkx3-1-201ENSMUST00000022646 Hmox1P14901 289 aa18.45■□□□□ 0.54
Nkx3-1-201ENSMUST00000022646 Atp8b2P98199 1209 aa18.45■□□□□ 0.54
Nkx3-1-201ENSMUST00000022646 Gsdma3Q5Y4Y6 464 aa18.44■□□□□ 0.54
Nkx3-1-201ENSMUST00000022646 Arfgef2A2A5R2 1792 aa18.44■□□□□ 0.54
Nkx3-1-201ENSMUST00000022646 Zkscan16A2ALW2 728 aa18.44■□□□□ 0.54
Nkx3-1-201ENSMUST00000022646 Stk36Q69ZM6 1316 aa18.44■□□□□ 0.54
Nkx3-1-201ENSMUST00000022646 Pnpla7A2AJ88 1352 aa18.43■□□□□ 0.54
Nkx3-1-201ENSMUST00000022646 Vsig10D3YX43 558 aa18.43■□□□□ 0.54
Nkx3-1-201ENSMUST00000022646 Ano8Q6PB70 1060 aa18.43■□□□□ 0.54
Nkx3-1-201ENSMUST00000022646 Rasa1E9PYG6 1038 aa18.42■□□□□ 0.54
Nkx3-1-201ENSMUST00000022646 Isy1Q69ZQ2 285 aaKnown RBP18.42■□□□□ 0.54
Nkx3-1-201ENSMUST00000022646 Mrps27Q8BK72 415 aaKnown RBP18.42■□□□□ 0.54
Nkx3-1-201ENSMUST00000022646 Amotl2Q8K371 772 aa18.42■□□□□ 0.54
Nkx3-1-201ENSMUST00000022646 Myo5bP21271 1818 aa18.42■□□□□ 0.54
Nkx3-1-201ENSMUST00000022646 SlkO54988 1233 aa18.41■□□□□ 0.54
Nkx3-1-201ENSMUST00000022646 Cyp2d11P24457 504 aa18.41■□□□□ 0.54
Nkx3-1-201ENSMUST00000022646 Hsp90b1P08113 802 aaKnown RBP18.4■□□□□ 0.54
Nkx3-1-201ENSMUST00000022646 Mcmdc2E9Q956 681 aa18.4■□□□□ 0.54
Nkx3-1-201ENSMUST00000022646 Kif20aP97329 887 aa18.39■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 C3P01027 1663 aa18.39■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 Rnf123Q5XPI3 1314 aa18.39■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 GphnQ8BUV3 769 aaKnown RBP18.38■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 TatQ8QZR1 454 aa18.38■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 Amotl1Q9D4H4 968 aa18.38■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 Tmx3Q8BXZ1 456 aa18.38■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 CoilQ5SU73 570 aa18.37■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 Gdpd2Q9ESM6 539 aa18.37■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 Cnksr1A2A9K7 700 aa18.36■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 Tpx2A2APB8 745 aaKnown RBP18.36■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 Zdhhc9P59268 364 aa18.36■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 Nol8Q3UHX0 1147 aaKnown RBP18.36■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 Chmp4cQ9D7F7 232 aa18.36■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 MyclP10166 368 aa18.36■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 Eif4a1P60843 406 aaKnown RBP18.36■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 NexnQ7TPW1 607 aa18.35■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 Phactr2B1AVP0 632 aa18.35■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 MccE9PWI3 1003 aa18.35■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 Fyb1O35601 819 aa18.35■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 Ier5O89113 308 aa18.35■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 Arhgef1Q61210 920 aaKnown RBP18.35■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 Lmtk3Q5XJV6 1424 aa18.35■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 Nup153E9Q3G8 1462 aaKnown RBP18.35■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 Tshz3Q8CGV9 1081 aa18.34■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 Vwa3bJ9JI28 736 aa18.34■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 LlphQ9D945 130 aaKnown RBP18.34■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 Scaf1Q5U4C3 1256 aaKnown RBP18.34■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 Exoc6bA6H5Z3 810 aa18.33■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 Zap70P43404 618 aa18.33■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 Kdm6aO70546 1401 aa18.33■□□□□ 0.53
Nkx3-1-201ENSMUST00000022646 Fkbp4P30416 458 aa18.33■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Tlr7P58681 1050 aa18.33■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Slc4a10Q5DTL9 1118 aa18.33■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Dnajc10Q9DC23 793 aa18.32■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Tmem2Q5FWI3 1383 aa18.32■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Ncoa4Q5U4H9 625 aa18.32■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Pdcl3Q8BVF2 240 aa18.32■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 AnlnQ8K298 1121 aaKnown RBP18.32■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Gimap6Q8K349 305 aa18.32■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Noc3lQ8VI84 807 aaKnown RBP18.32■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 PtmsQ9D0J8 101 aaKnown RBP18.32■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Dlg5E9Q9R9 1921 aa18.32■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Nfat5Q9WV30 1534 aa18.31■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Btbd11Q6GQW0 1109 aa18.31■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Sipa1l2Q80TE4 1722 aa18.3■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 ImpactO55091 318 aa18.3■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Nkx2-3P97334 362 aa18.3■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Bend3Q6PAL0 825 aa18.3■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Jakmip1Q8BVL9 626 aa18.3■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Echdc1Q9D9V3 322 aa18.3■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Trim44Q9QXA7 346 aa18.3■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Cfdp1O88271 295 aaKnown RBP18.3■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Filip1lQ6P6L0 1131 aa18.3■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Unc5clQ6R653 518 aa18.3■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 EvcP57680 1005 aa18.3■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Anapc15P60007 132 aa18.3■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Map3k13Q1HKZ5 959 aa18.3■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 TimelessQ9R1X4 1197 aa18.3■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Mum1Q6DID5 682 aa18.29■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Mphosph10Q810V0 681 aaKnown RBP18.29■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Kcnh5Q920E3 988 aa18.29■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Pmfbp1Q9WVQ0 1022 aa18.29■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Robo1O89026 1612 aa18.29■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Bcl2l13P59017 434 aa18.29■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Atg3Q9CPX6 314 aa18.29■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Abcc12Q80WJ6 1366 aa18.29■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Col1a2Q01149 1372 aa18.28■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Fmnl2A2APV2 1086 aa18.28■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Hoxa7P02830 229 aa18.28■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Paxip1Q6NZQ4 1056 aa18.28■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Kcnn1Q9EQR3 537 aa18.28■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Tns3Q5SSZ5 1440 aa18.27■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Bcl9Q9D219 1425 aa18.27■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Stk3Q9JI10 497 aa18.27■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Col14a1Q80X19 1797 aa18.27■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Adcy9P51830 1353 aa18.27■□□□□ 0.52
Nkx3-1-201ENSMUST00000022646 Cct4P80315 539 aaKnown RBP18.27■□□□□ 0.51
Nkx3-1-201ENSMUST00000022646 Ppp1r37Q8BKR5 712 aa18.27■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 8.2 ms