RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Ints3Q7TPD0 1041 aaKnown RBP14.54□□□□□ -0.08
Rfx1-201ENSMUST00000005600 NcapgE9PWG6 1004 aa14.54□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Irx6Q9ER75 438 aa14.54□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Tnnt1O88346 262 aa14.53□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Mindy4Q3UQI9 744 aa14.53□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Mknk2Q8CDB0 459 aa14.53□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Kif20bQ80WE4 1774 aaKnown RBP14.53□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Kif1aP33173 1695 aa14.53□□□□□ -0.08
Rfx1-201ENSMUST00000005600 MsnP26041 577 aaKnown RBP14.53□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Ddx19aQ61655 478 aaKnown RBP14.53□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Mmp8O70138 465 aa14.52□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Vgll3P85442 326 aa14.52□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Pabpn1Q8CCS6 302 aaKnown RBP14.52□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Mdc1Q5PSV9 1707 aa14.52□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Strn4P58404 760 aa14.52□□□□□ -0.09
Rfx1-201ENSMUST00000005600 PtpruB1AUH1 1446 aa14.51□□□□□ -0.09
Rfx1-201ENSMUST00000005600 4930407I10RikD3Z5T8 1512 aa14.51□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Fam184aE9PW83 1143 aa14.51□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Atp8b2P98199 1209 aa14.51□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Mum1Q6DID5 682 aa14.51□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Phf23Q8BSN5 401 aa14.51□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Anp32cQ64G17 123 aa14.5□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Noc3lQ8VI84 807 aaKnown RBP14.5□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Astn2Q80Z10 1352 aa14.5□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Rnf123Q5XPI3 1314 aa14.5□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Pdzrn3Q69ZS0 1063 aa14.5□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Smc3Q9CW03 1217 aaKnown RBP14.49□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Pnma3Q8JZW8 466 aa14.49□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Cabp4Q8VHC5 271 aa14.49□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Slx4ipQ9D7Y9 413 aa14.49□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Utp3Q9JI13 469 aaKnown RBP14.49□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Kif3aP28741 701 aa14.49□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Irf5P56477 497 aa14.49□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Nol8Q3UHX0 1147 aaKnown RBP14.49□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Frmpd2A0A140LI67 1392 aa14.49□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Gemin5Q8BX17 1502 aaKnown RBP14.49□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Snap23O09044 210 aa14.48□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Hoxa7P02830 229 aa14.48□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Slc4a10Q5DTL9 1118 aa14.48□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Cul9Q80TT8 1865 aa14.48□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Kif13aQ9EQW7 1749 aa14.48□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Nwd1A6H603 1563 aa14.48□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Mcmdc2E9Q956 681 aa14.48□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Utp18Q5SSI6 552 aaKnown RBP14.48□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Stk3Q9JI10 497 aa14.48□□□□□ -0.09
Rfx1-201ENSMUST00000005600 HnrnpmQ9D0E1 729 aaKnown RBP14.48□□□□□ -0.09
Rfx1-201ENSMUST00000005600 PplQ9R269 1755 aa14.48□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Sox12Q04890 314 aa14.48□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Samm50Q8BGH2 469 aa14.48□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Pof1bQ8K4L4 587 aa14.48□□□□□ -0.09
Rfx1-201ENSMUST00000005600 EzrP26040 586 aaKnown RBP14.47□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Scaf1Q5U4C3 1256 aaKnown RBP14.47□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Pmfbp1Q9WVQ0 1022 aa14.47□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Tpx2A2APB8 745 aaKnown RBP14.47□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Wdr78E9PYY5 807 aa14.47□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Gjb2Q00977 226 aa14.47□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Hvcn1Q3U2S8 269 aa14.47□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Larp1bA0A0A6YXJ7 370 aaKnown RBP14.46□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Chd4Q6PDQ2 1915 aaKnown RBP14.46□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Stk36Q69ZM6 1316 aa14.46□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Cdk12Q14AX6 1484 aaKnown RBP14.46□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Gm156Q58A37 223 aa14.46□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Sf3a1Q8K4Z5 791 aaKnown RBP14.46□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Ccar2Q8VDP4 922 aaKnown RBP14.46□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Med4Q9CQA5 270 aa14.46□□□□□ -0.09
Rfx1-201ENSMUST00000005600 Tnnt2P50752 301 aa14.46□□□□□ -0.1
Rfx1-201ENSMUST00000005600 Adcy5P84309 1262 aa14.46□□□□□ -0.1
Rfx1-201ENSMUST00000005600 Ccne1Q61457 408 aa14.46□□□□□ -0.1
Rfx1-201ENSMUST00000005600 Ppp1r18Q8BQ30 594 aa14.46□□□□□ -0.1
Rfx1-201ENSMUST00000005600 Nom1Q3UFM5 854 aaKnown RBP14.45□□□□□ -0.1
Rfx1-201ENSMUST00000005600 Gm21190A0A0G2JGJ6 266 aa14.45□□□□□ -0.1
Rfx1-201ENSMUST00000005600 Sytl4Q9R0Q1 673 aa14.45□□□□□ -0.1
Rfx1-201ENSMUST00000005600 Stx6Q9JKK1 255 aa14.45□□□□□ -0.1
Rfx1-201ENSMUST00000005600 PzpQ61838 1495 aa14.45□□□□□ -0.1
Rfx1-201ENSMUST00000005600 Brpf1B2RRD7 1212 aa14.44□□□□□ -0.1
Rfx1-201ENSMUST00000005600 Bms1Q6PGF5 1284 aaKnown RBP14.44□□□□□ -0.1
Rfx1-201ENSMUST00000005600 SrrtQ99MR6 875 aaKnown RBP14.44□□□□□ -0.1
Rfx1-201ENSMUST00000005600 Ccdc7Q9D541 371 aa14.44□□□□□ -0.1
Rfx1-201ENSMUST00000005600 Ube2hP62257 183 aa14.44□□□□□ -0.1
Rfx1-201ENSMUST00000005600 TimelessQ9R1X4 1197 aa14.44□□□□□ -0.1
Rfx1-201ENSMUST00000005600 Ythdc1E9Q5K9 736 aaKnown RBP14.44□□□□□ -0.1
Rfx1-201ENSMUST00000005600 Bach2P97303 839 aa14.44□□□□□ -0.1
Rfx1-201ENSMUST00000005600 Ccdc178Q8CDV0 866 aa14.44□□□□□ -0.1
Rfx1-201ENSMUST00000005600 Tceal9Q9DD24 104 aa14.44□□□□□ -0.1
Rfx1-201ENSMUST00000005600 Mlh1Q9JK91 760 aa14.44□□□□□ -0.1
Rfx1-201ENSMUST00000005600 Babam1Q3UI43 333 aa14.43□□□□□ -0.1
Rfx1-201ENSMUST00000005600 Chpf2Q3UU43 768 aa14.43□□□□□ -0.1
Rfx1-201ENSMUST00000005600 Dennd6aQ8BH65 605 aa14.43□□□□□ -0.1
Rfx1-201ENSMUST00000005600 Mad1l1Q9WTX8 717 aaKnown RBP14.43□□□□□ -0.1
Rfx1-201ENSMUST00000005600 Wdr93Q402B2 695 aa14.43□□□□□ -0.1
Rfx1-201ENSMUST00000005600 HypkQ9CR41 129 aa14.43□□□□□ -0.1
Rfx1-201ENSMUST00000005600 Cspp1B2RX88 1205 aa14.43□□□□□ -0.1
Rfx1-201ENSMUST00000005600 Usp48Q3V0C5 1052 aa14.43□□□□□ -0.1
Rfx1-201ENSMUST00000005600 Igsf1Q7TQA1 1317 aa14.43□□□□□ -0.1
Rfx1-201ENSMUST00000005600 Gm973E9Q295 1059 aa14.42□□□□□ -0.1
Rfx1-201ENSMUST00000005600 Eya1P97767 591 aa14.42□□□□□ -0.1
Rfx1-201ENSMUST00000005600 Fbxo2Q80UW2 297 aa14.42□□□□□ -0.1
Rfx1-201ENSMUST00000005600 Rad50P70388 1312 aa14.42□□□□□ -0.1
Rfx1-201ENSMUST00000005600 Cavin1O54724 392 aa14.42□□□□□ -0.1
Rfx1-201ENSMUST00000005600 Mcm3P25206 812 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 10.8 ms