RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Gm21663A0A0G2JE01 267 aa10.6□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 5031410I06RikE9Q4E0 267 aa10.6□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Gm5862K7N5V5 267 aa10.6□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Gm10220K7N660 267 aa10.6□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Babam1Q3UI43 333 aa10.6□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Spty2d1Q68FG3 682 aa10.6□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Ehbp1Q69ZW3 1231 aa10.6□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Ncbp3Q8BZR9 615 aaKnown RBP10.6□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Ccdc73Q8CDM4 1066 aa10.6□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Smc5Q8CG46 1101 aaKnown RBP10.6□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Ttc5Q99LG4 440 aa10.6□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Stx1aO35526 288 aa10.6□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Hmgb1P63158 215 aaKnown RBP10.6□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 GphnQ8BUV3 769 aaKnown RBP10.6□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Usp37Q8C0R0 979 aa10.6□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Vps36Q91XD6 386 aa10.6□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Arhgef5E9Q7D5 1581 aa10.6□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Gjb2Q00977 226 aa10.6□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Tbc1d2bQ3U0J8 965 aa10.6□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Tmem87bQ8BKU8 555 aa10.6□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Rnf34Q99KR6 376 aa10.6□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 CadpsQ80TJ1 1355 aa10.6□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Pde4bB1AWC9 736 aa10.6□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Ankib1Q6ZPS6 1085 aa10.6□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Samm50Q8BGH2 469 aa10.6□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Gtf3c5Q8R2T8 520 aa10.6□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Chrna2Q91X60 512 aa10.6□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Cabp2Q9JLK4 216 aa10.6□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Syce3B5KM66 88 aa10.59□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Zfp42P22227 288 aa10.59□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Btbd11Q6GQW0 1109 aa10.59□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Ddx10Q80Y44 875 aaKnown RBP10.59□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Bag4Q8CI61 457 aa10.59□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 NgdnQ9DB96 315 aaKnown RBP10.59□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Asxl1P59598 1514 aa10.59□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 NapbP28663 298 aa10.59□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Ccdc158Q8CDI6 1109 aa10.59□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Mtmr3Q8K296 1196 aa10.59□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Rapgef3Q8VCC8 918 aa10.59□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Rcan3Q9JKK0 239 aa10.59□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Eif3j1Q3UGC7 261 aaKnown RBP10.59□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Eif3j2Q66JS6 263 aa10.59□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Cc2d1bQ8BRN9 848 aa10.59□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Podxl2Q8CAE9 603 aa10.59□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Speer4bQ9D9F7 267 aa10.59□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Fam107bQ3TGF2 131 aa10.59□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Gse1Q3U3C9 1213 aa10.59□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Gle1Q8R322 699 aa10.59□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Krt23Q99PS0 422 aa10.59□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Ddx23D3Z0M9 819 aaKnown RBP10.58□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Bcl11bQ99PV8 884 aa10.58□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Tagap1P0CAX8 505 aa10.58□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Ube2hP62257 183 aa10.58□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Spg7Q3ULF4 781 aa10.58□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Fgfr1opQ66JX5 399 aa10.58□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Fmnl3Q6ZPF4 1028 aa10.58□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Slc26a8Q8R0C3 999 aa10.58□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 BbxQ8VBW5 907 aa10.58□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Cul5Q9D5V5 780 aa10.58□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Homer1Q9Z2Y3 366 aa10.58□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Nop53Q8BK35 484 aaKnown RBP10.58□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Map7d1A2AJI0 846 aa10.57□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Iffo1Q8BXL9 562 aa10.57□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Stmn4P63042 189 aa10.57□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Bbof1Q3V079 533 aa10.57□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Trim25Q61510 634 aaKnown RBP10.57□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Brf1Q8CFK2 676 aa10.57□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Igf1rQ60751 1373 aa10.57□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 E9QMW4 1145 aa10.57□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Ppfibp2O35711 882 aa10.57□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Secisbp2lQ6A098 1086 aaKnown RBP10.57□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Maco1Q7TQE6 664 aaKnown RBP10.57□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Lrsam1Q80ZI6 727 aa10.57□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Golim4Q8BXA1 655 aa10.57□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Hoxb7P09024 217 aa10.57□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 IbspQ61711 324 aa10.57□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Atf7Q8R0S1 413 aa10.57□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Krt7Q9DCV7 457 aa10.57□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Bag3Q9JLV1 577 aaKnown RBP10.57□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Phlpp2Q8BXA7 1320 aa10.57□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Pdia4P08003 638 aaKnown RBP10.56□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Dnajc2P54103 621 aaKnown RBP10.56□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Ppp1r9bQ6R891 817 aaKnown RBP10.56□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Brd3Q8K2F0 726 aaKnown RBP10.56□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Sept6Q9R1T4 434 aa10.56□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Rad54l2Q99NG0 1466 aa10.56□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Ell2Q3UKU1 639 aa10.56□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Exoc8Q6PGF7 716 aa10.56□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Ccdc178Q8CDV0 866 aa10.56□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 SfpqQ8VIJ6 699 aaKnown RBP10.56□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 PalmQ9Z0P4 383 aa10.56□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Exoc6bA6H5Z3 810 aa10.56□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Wdr63B2RY71 923 aa10.56□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Hs2st1Q8R3H7 356 aa10.56□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Ccdc42Q5SV66 316 aa10.56□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Sytl4Q9R0Q1 673 aa10.56□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Ttc21bQ0HA38 1315 aa10.56□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Zmym3Q9JLM4 1370 aa10.56□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Gm1043A0A140LJC2 1431 aa10.56□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Map3k5O35099 1380 aa10.55□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms