Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
DDX49Q9Y6V7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
DDX49Q9Y6V7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
DDX49Q9Y6V7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC22.54■■□□□ 1.2
DDX49Q9Y6V7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC22.54■■□□□ 1.2
DDX49Q9Y6V7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
DDX49Q9Y6V7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC22.54■■□□□ 1.2
DDX49Q9Y6V7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC22.54■■□□□ 1.2
DDX49Q9Y6V7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC22.54■■□□□ 1.2
DDX49Q9Y6V7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC22.54■■□□□ 1.2
DDX49Q9Y6V7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
DDX49Q9Y6V7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
DDX49Q9Y6V7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
DDX49Q9Y6V7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 AP002982.1-201ENST00000492365 877 ntBASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 CR392000.1-201ENST00000624770 1228 ntBASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
DDX49Q9Y6V7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC22.52■■□□□ 1.2
DDX49Q9Y6V7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
DDX49Q9Y6V7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
DDX49Q9Y6V7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
DDX49Q9Y6V7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC22.52■■□□□ 1.2
DDX49Q9Y6V7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
DDX49Q9Y6V7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
DDX49Q9Y6V7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
DDX49Q9Y6V7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC22.52■■□□□ 1.2
DDX49Q9Y6V7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC22.52■■□□□ 1.2
DDX49Q9Y6V7 NUDT16P1-203ENST00000513809 620 ntBASIC22.52■■□□□ 1.2
DDX49Q9Y6V7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC22.52■■□□□ 1.2
DDX49Q9Y6V7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
DDX49Q9Y6V7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC22.52■■□□□ 1.2
DDX49Q9Y6V7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC22.52■■□□□ 1.2
DDX49Q9Y6V7 AC141586.3-201ENST00000562166 1838 ntBASIC22.52■■□□□ 1.2
DDX49Q9Y6V7 TEX21P-204ENST00000641479 1693 ntBASIC22.52■■□□□ 1.2
DDX49Q9Y6V7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC22.52■■□□□ 1.19
DDX49Q9Y6V7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.19
DDX49Q9Y6V7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC22.52■■□□□ 1.19
DDX49Q9Y6V7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
DDX49Q9Y6V7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
DDX49Q9Y6V7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
DDX49Q9Y6V7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC22.51■■□□□ 1.19
DDX49Q9Y6V7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
DDX49Q9Y6V7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
DDX49Q9Y6V7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
DDX49Q9Y6V7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
DDX49Q9Y6V7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
DDX49Q9Y6V7 MMP23A-201ENST00000234610 1017 ntBASIC22.51■■□□□ 1.19
DDX49Q9Y6V7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC22.51■■□□□ 1.19
DDX49Q9Y6V7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC22.51■■□□□ 1.19
DDX49Q9Y6V7 AC004264.1-201ENST00000608354 794 ntBASIC22.51■■□□□ 1.19
DDX49Q9Y6V7 MIR6786-201ENST00000616843 113 ntBASIC22.51■■□□□ 1.19
DDX49Q9Y6V7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
DDX49Q9Y6V7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
DDX49Q9Y6V7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
DDX49Q9Y6V7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
DDX49Q9Y6V7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
DDX49Q9Y6V7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC22.51■■□□□ 1.19
DDX49Q9Y6V7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC22.51■■□□□ 1.19
DDX49Q9Y6V7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
DDX49Q9Y6V7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC22.5■■□□□ 1.19
DDX49Q9Y6V7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
DDX49Q9Y6V7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
DDX49Q9Y6V7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
DDX49Q9Y6V7 PHGDH-210ENST00000641115 1638 ntBASIC22.5■■□□□ 1.19
DDX49Q9Y6V7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
DDX49Q9Y6V7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
DDX49Q9Y6V7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC22.5■■□□□ 1.19
DDX49Q9Y6V7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
DDX49Q9Y6V7 AL353807.1-201ENST00000427475 662 ntBASIC22.5■■□□□ 1.19
DDX49Q9Y6V7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
DDX49Q9Y6V7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms