Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HCN4Q9Y3Q4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HCN4Q9Y3Q4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
HCN4Q9Y3Q4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HCN4Q9Y3Q4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HCN4Q9Y3Q4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HCN4Q9Y3Q4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HCN4Q9Y3Q4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HCN4Q9Y3Q4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HCN4Q9Y3Q4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HCN4Q9Y3Q4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.22■□□□□ 0.67
HCN4Q9Y3Q4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HCN4Q9Y3Q4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
HCN4Q9Y3Q4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.22■□□□□ 0.67
HCN4Q9Y3Q4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.22■□□□□ 0.67
HCN4Q9Y3Q4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.22■□□□□ 0.67
HCN4Q9Y3Q4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
HCN4Q9Y3Q4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HCN4Q9Y3Q4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
HCN4Q9Y3Q4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HCN4Q9Y3Q4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.22■□□□□ 0.67
HCN4Q9Y3Q4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCN4Q9Y3Q4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCN4Q9Y3Q4 AC233702.3-201ENST00000578656 1387 ntBASIC19.21■□□□□ 0.67
HCN4Q9Y3Q4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCN4Q9Y3Q4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCN4Q9Y3Q4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.21■□□□□ 0.67
HCN4Q9Y3Q4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCN4Q9Y3Q4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.21■□□□□ 0.67
HCN4Q9Y3Q4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.21■□□□□ 0.67
HCN4Q9Y3Q4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCN4Q9Y3Q4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.21■□□□□ 0.67
HCN4Q9Y3Q4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.21■□□□□ 0.67
HCN4Q9Y3Q4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCN4Q9Y3Q4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HCN4Q9Y3Q4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.21■□□□□ 0.67
HCN4Q9Y3Q4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCN4Q9Y3Q4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 AC121338.2-201ENST00000622535 1744 ntBASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 NUS1P2-201ENST00000417358 873 ntBASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 MIR7706-201ENST00000613747 67 ntBASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCN4Q9Y3Q4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
HCN4Q9Y3Q4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HCN4Q9Y3Q4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
HCN4Q9Y3Q4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.19■□□□□ 0.66
HCN4Q9Y3Q4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HCN4Q9Y3Q4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HCN4Q9Y3Q4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HCN4Q9Y3Q4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HCN4Q9Y3Q4 PAWRP1-201ENST00000451083 565 ntBASIC19.19■□□□□ 0.66
HCN4Q9Y3Q4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.19■□□□□ 0.66
HCN4Q9Y3Q4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HCN4Q9Y3Q4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HCN4Q9Y3Q4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.19■□□□□ 0.66
HCN4Q9Y3Q4 AC040169.1-201ENST00000565382 521 ntBASIC19.19■□□□□ 0.66
HCN4Q9Y3Q4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.19■□□□□ 0.66
HCN4Q9Y3Q4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HCN4Q9Y3Q4 IGHV3-41-201ENST00000613121 348 ntBASIC19.19■□□□□ 0.66
HCN4Q9Y3Q4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.19■□□□□ 0.66
HCN4Q9Y3Q4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.19■□□□□ 0.66
HCN4Q9Y3Q4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HCN4Q9Y3Q4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
HCN4Q9Y3Q4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HCN4Q9Y3Q4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HCN4Q9Y3Q4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HCN4Q9Y3Q4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HCN4Q9Y3Q4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HCN4Q9Y3Q4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HCN4Q9Y3Q4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms