Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SSX2IPQ9Y2D8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSX2IPQ9Y2D8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.17■□□□□ 0.82
SSX2IPQ9Y2D8 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SSX2IPQ9Y2D8 HCG4P8-203ENST00000443049 980 ntBASIC20.17■□□□□ 0.82
SSX2IPQ9Y2D8 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.17■□□□□ 0.82
SSX2IPQ9Y2D8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.17■□□□□ 0.82
SSX2IPQ9Y2D8 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSX2IPQ9Y2D8 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.17■□□□□ 0.82
SSX2IPQ9Y2D8 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.17■□□□□ 0.82
SSX2IPQ9Y2D8 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SSX2IPQ9Y2D8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.17■□□□□ 0.82
SSX2IPQ9Y2D8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSX2IPQ9Y2D8 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.17■□□□□ 0.82
SSX2IPQ9Y2D8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SSX2IPQ9Y2D8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SSX2IPQ9Y2D8 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSX2IPQ9Y2D8 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SSX2IPQ9Y2D8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSX2IPQ9Y2D8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.17■□□□□ 0.82
SSX2IPQ9Y2D8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSX2IPQ9Y2D8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SSX2IPQ9Y2D8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSX2IPQ9Y2D8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSX2IPQ9Y2D8 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSX2IPQ9Y2D8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSX2IPQ9Y2D8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSX2IPQ9Y2D8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SSX2IPQ9Y2D8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.16■□□□□ 0.82
SSX2IPQ9Y2D8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSX2IPQ9Y2D8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSX2IPQ9Y2D8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SSX2IPQ9Y2D8 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SSX2IPQ9Y2D8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
SSX2IPQ9Y2D8 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
SSX2IPQ9Y2D8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SSX2IPQ9Y2D8 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.16■□□□□ 0.82
SSX2IPQ9Y2D8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.16■□□□□ 0.82
SSX2IPQ9Y2D8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSX2IPQ9Y2D8 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.16■□□□□ 0.82
SSX2IPQ9Y2D8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.16■□□□□ 0.82
SSX2IPQ9Y2D8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.16■□□□□ 0.82
SSX2IPQ9Y2D8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSX2IPQ9Y2D8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSX2IPQ9Y2D8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.16■□□□□ 0.82
SSX2IPQ9Y2D8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSX2IPQ9Y2D8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSX2IPQ9Y2D8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSX2IPQ9Y2D8 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SSX2IPQ9Y2D8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.16■□□□□ 0.82
SSX2IPQ9Y2D8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.16■□□□□ 0.82
SSX2IPQ9Y2D8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.16■□□□□ 0.82
SSX2IPQ9Y2D8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.16■□□□□ 0.82
SSX2IPQ9Y2D8 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSX2IPQ9Y2D8 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSX2IPQ9Y2D8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSX2IPQ9Y2D8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SSX2IPQ9Y2D8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSX2IPQ9Y2D8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SSX2IPQ9Y2D8 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.15■□□□□ 0.82
SSX2IPQ9Y2D8 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.15■□□□□ 0.82
SSX2IPQ9Y2D8 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSX2IPQ9Y2D8 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SSX2IPQ9Y2D8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SSX2IPQ9Y2D8 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.15■□□□□ 0.82
SSX2IPQ9Y2D8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSX2IPQ9Y2D8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSX2IPQ9Y2D8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.15■□□□□ 0.82
SSX2IPQ9Y2D8 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.15■□□□□ 0.82
SSX2IPQ9Y2D8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.15■□□□□ 0.82
SSX2IPQ9Y2D8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SSX2IPQ9Y2D8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.15■□□□□ 0.82
SSX2IPQ9Y2D8 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSX2IPQ9Y2D8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSX2IPQ9Y2D8 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SSX2IPQ9Y2D8 AC099778.1-201ENST00000568593 1911 ntBASIC20.15■□□□□ 0.82
SSX2IPQ9Y2D8 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SSX2IPQ9Y2D8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.15■□□□□ 0.82
SSX2IPQ9Y2D8 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.15■□□□□ 0.82
SSX2IPQ9Y2D8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSX2IPQ9Y2D8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SSX2IPQ9Y2D8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.14■□□□□ 0.82
SSX2IPQ9Y2D8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SSX2IPQ9Y2D8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SSX2IPQ9Y2D8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.14■□□□□ 0.81
SSX2IPQ9Y2D8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SSX2IPQ9Y2D8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SSX2IPQ9Y2D8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSX2IPQ9Y2D8 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSX2IPQ9Y2D8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SSX2IPQ9Y2D8 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SSX2IPQ9Y2D8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.14■□□□□ 0.81
SSX2IPQ9Y2D8 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.14■□□□□ 0.81
SSX2IPQ9Y2D8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SSX2IPQ9Y2D8 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.14■□□□□ 0.81
SSX2IPQ9Y2D8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.14■□□□□ 0.81
SSX2IPQ9Y2D8 SPDYE15P-201ENST00000424157 909 ntBASIC20.14■□□□□ 0.81
SSX2IPQ9Y2D8 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.14■□□□□ 0.81
SSX2IPQ9Y2D8 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.14■□□□□ 0.81
SSX2IPQ9Y2D8 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms