Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NOD1Q9Y239 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NOD1Q9Y239 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.68■□□□□ 0.9
NOD1Q9Y239 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NOD1Q9Y239 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.68■□□□□ 0.9
NOD1Q9Y239 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NOD1Q9Y239 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NOD1Q9Y239 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.68■□□□□ 0.9
NOD1Q9Y239 AL121772.3-201ENST00000610840 674 ntBASIC20.68■□□□□ 0.9
NOD1Q9Y239 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NOD1Q9Y239 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NOD1Q9Y239 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NOD1Q9Y239 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NOD1Q9Y239 KRT8P7-201ENST00000533003 1432 ntBASIC20.68■□□□□ 0.9
NOD1Q9Y239 AC008556.1-201ENST00000610908 2040 ntBASIC20.68■□□□□ 0.9
NOD1Q9Y239 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NOD1Q9Y239 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NOD1Q9Y239 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NOD1Q9Y239 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.68■□□□□ 0.9
NOD1Q9Y239 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NOD1Q9Y239 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NOD1Q9Y239 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NOD1Q9Y239 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NOD1Q9Y239 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NOD1Q9Y239 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.67■□□□□ 0.9
NOD1Q9Y239 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NOD1Q9Y239 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
NOD1Q9Y239 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NOD1Q9Y239 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NOD1Q9Y239 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NOD1Q9Y239 FDX1P1-201ENST00000449115 551 ntBASIC20.67■□□□□ 0.9
NOD1Q9Y239 AC091304.2-201ENST00000564639 760 ntBASIC20.67■□□□□ 0.9
NOD1Q9Y239 RNF126P1-202ENST00000569893 925 ntBASIC20.67■□□□□ 0.9
NOD1Q9Y239 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.67■□□□□ 0.9
NOD1Q9Y239 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.67■□□□□ 0.9
NOD1Q9Y239 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.67■□□□□ 0.9
NOD1Q9Y239 AC010240.3-201ENST00000607688 395 ntBASIC20.67■□□□□ 0.9
NOD1Q9Y239 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.67■□□□□ 0.9
NOD1Q9Y239 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NOD1Q9Y239 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NOD1Q9Y239 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NOD1Q9Y239 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.67■□□□□ 0.9
NOD1Q9Y239 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NOD1Q9Y239 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
NOD1Q9Y239 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NOD1Q9Y239 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.67■□□□□ 0.9
NOD1Q9Y239 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NOD1Q9Y239 AL512353.2-201ENST00000448759 1962 ntBASIC20.66■□□□□ 0.9
NOD1Q9Y239 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
NOD1Q9Y239 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NOD1Q9Y239 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
NOD1Q9Y239 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NOD1Q9Y239 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NOD1Q9Y239 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.66■□□□□ 0.9
NOD1Q9Y239 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NOD1Q9Y239 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.66■□□□□ 0.9
NOD1Q9Y239 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
NOD1Q9Y239 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.66■□□□□ 0.9
NOD1Q9Y239 DRAXINP1-201ENST00000437611 948 ntBASIC20.66■□□□□ 0.9
NOD1Q9Y239 KRT17P6-201ENST00000453795 1220 ntBASIC20.66■□□□□ 0.9
NOD1Q9Y239 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NOD1Q9Y239 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NOD1Q9Y239 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.66■□□□□ 0.9
NOD1Q9Y239 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.66■□□□□ 0.9
NOD1Q9Y239 TPSP2-201ENST00000561760 610 ntBASIC20.66■□□□□ 0.9
NOD1Q9Y239 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.66■□□□□ 0.9
NOD1Q9Y239 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
NOD1Q9Y239 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.66■□□□□ 0.9
NOD1Q9Y239 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.66■□□□□ 0.9
NOD1Q9Y239 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NOD1Q9Y239 Z83836.1-201ENST00000624605 1642 ntBASIC20.66■□□□□ 0.9
NOD1Q9Y239 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NOD1Q9Y239 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.66■□□□□ 0.9
NOD1Q9Y239 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NOD1Q9Y239 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
NOD1Q9Y239 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.66■□□□□ 0.9
NOD1Q9Y239 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.66■□□□□ 0.9
NOD1Q9Y239 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NOD1Q9Y239 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
NOD1Q9Y239 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NOD1Q9Y239 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NOD1Q9Y239 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.65■□□□□ 0.9
NOD1Q9Y239 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NOD1Q9Y239 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.65■□□□□ 0.9
NOD1Q9Y239 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NOD1Q9Y239 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NOD1Q9Y239 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NOD1Q9Y239 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.65■□□□□ 0.9
NOD1Q9Y239 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.65■□□□□ 0.9
NOD1Q9Y239 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
NOD1Q9Y239 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NOD1Q9Y239 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NOD1Q9Y239 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NOD1Q9Y239 TOB2P1-201ENST00000469761 992 ntBASIC20.65■□□□□ 0.9
NOD1Q9Y239 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.65■□□□□ 0.9
NOD1Q9Y239 AL732292.2-201ENST00000609649 430 ntBASIC20.65■□□□□ 0.9
NOD1Q9Y239 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
NOD1Q9Y239 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.65■□□□□ 0.9
NOD1Q9Y239 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.65■□□□□ 0.9
NOD1Q9Y239 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms