Protein–RNA interactions for Protein: Q9UPT9

USP22, Ubiquitin carboxyl-terminal hydrolase 22, humanhuman

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP22Q9UPT9 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
USP22Q9UPT9 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP22Q9UPT9 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP22Q9UPT9 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP22Q9UPT9 AIRN-201ENST00000601203 4374 ntBASIC17.75■□□□□ 0.43
USP22Q9UPT9 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.74■□□□□ 0.43
USP22Q9UPT9 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP22Q9UPT9 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP22Q9UPT9 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP22Q9UPT9 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP22Q9UPT9 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP22Q9UPT9 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.74■□□□□ 0.43
USP22Q9UPT9 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP22Q9UPT9 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.74■□□□□ 0.43
USP22Q9UPT9 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.74■□□□□ 0.43
USP22Q9UPT9 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.74■□□□□ 0.43
USP22Q9UPT9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.74■□□□□ 0.43
USP22Q9UPT9 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP22Q9UPT9 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP22Q9UPT9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP22Q9UPT9 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.74■□□□□ 0.43
USP22Q9UPT9 AL160286.2-201ENST00000567150 934 ntBASIC17.74■□□□□ 0.43
USP22Q9UPT9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.74■□□□□ 0.43
USP22Q9UPT9 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.74■□□□□ 0.43
USP22Q9UPT9 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
USP22Q9UPT9 RCC2P6-201ENST00000526625 1557 ntBASIC17.74■□□□□ 0.43
USP22Q9UPT9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP22Q9UPT9 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP22Q9UPT9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.73■□□□□ 0.43
USP22Q9UPT9 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP22Q9UPT9 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
USP22Q9UPT9 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP22Q9UPT9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP22Q9UPT9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP22Q9UPT9 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP22Q9UPT9 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP22Q9UPT9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
USP22Q9UPT9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP22Q9UPT9 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
USP22Q9UPT9 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
USP22Q9UPT9 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP22Q9UPT9 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP22Q9UPT9 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP22Q9UPT9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.73■□□□□ 0.43
USP22Q9UPT9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.73■□□□□ 0.43
USP22Q9UPT9 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.73■□□□□ 0.43
USP22Q9UPT9 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.73■□□□□ 0.43
USP22Q9UPT9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.73■□□□□ 0.43
USP22Q9UPT9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.73■□□□□ 0.43
USP22Q9UPT9 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.73■□□□□ 0.43
USP22Q9UPT9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP22Q9UPT9 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP22Q9UPT9 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP22Q9UPT9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
USP22Q9UPT9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
USP22Q9UPT9 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP22Q9UPT9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP22Q9UPT9 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP22Q9UPT9 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP22Q9UPT9 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP22Q9UPT9 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP22Q9UPT9 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP22Q9UPT9 KRT8P41-201ENST00000533985 1514 ntBASIC17.72■□□□□ 0.43
USP22Q9UPT9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.72■□□□□ 0.43
USP22Q9UPT9 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.72■□□□□ 0.43
USP22Q9UPT9 ESPNP-201ENST00000270691 2015 ntBASIC17.72■□□□□ 0.43
USP22Q9UPT9 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.72■□□□□ 0.43
USP22Q9UPT9 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP22Q9UPT9 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP22Q9UPT9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP22Q9UPT9 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP22Q9UPT9 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP22Q9UPT9 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP22Q9UPT9 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP22Q9UPT9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
USP22Q9UPT9 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP22Q9UPT9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP22Q9UPT9 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.72■□□□□ 0.43
USP22Q9UPT9 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.72■□□□□ 0.43
USP22Q9UPT9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
USP22Q9UPT9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.72■□□□□ 0.43
USP22Q9UPT9 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.72■□□□□ 0.43
USP22Q9UPT9 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP22Q9UPT9 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP22Q9UPT9 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP22Q9UPT9 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.72■□□□□ 0.43
USP22Q9UPT9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
USP22Q9UPT9 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.72■□□□□ 0.43
USP22Q9UPT9 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.72■□□□□ 0.43
USP22Q9UPT9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
USP22Q9UPT9 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP22Q9UPT9 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
USP22Q9UPT9 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.71■□□□□ 0.43
USP22Q9UPT9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.71■□□□□ 0.43
USP22Q9UPT9 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP22Q9UPT9 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP22Q9UPT9 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
USP22Q9UPT9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP22Q9UPT9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.71■□□□□ 0.43
USP22Q9UPT9 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms