Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHD7Q9P2D1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHD7Q9P2D1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHD7Q9P2D1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.91■□□□□ 0.78
CHD7Q9P2D1 AL157384.1-201ENST00000445995 2473 ntBASIC19.91■□□□□ 0.78
CHD7Q9P2D1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHD7Q9P2D1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.91■□□□□ 0.78
CHD7Q9P2D1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHD7Q9P2D1 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHD7Q9P2D1 AF186996.4-201ENST00000467186 377 ntBASIC19.91■□□□□ 0.78
CHD7Q9P2D1 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHD7Q9P2D1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CHD7Q9P2D1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CHD7Q9P2D1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHD7Q9P2D1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.9■□□□□ 0.78
CHD7Q9P2D1 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
CHD7Q9P2D1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.9■□□□□ 0.78
CHD7Q9P2D1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHD7Q9P2D1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.9■□□□□ 0.78
CHD7Q9P2D1 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CHD7Q9P2D1 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.9■□□□□ 0.78
CHD7Q9P2D1 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.9■□□□□ 0.78
CHD7Q9P2D1 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.9■□□□□ 0.78
CHD7Q9P2D1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHD7Q9P2D1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.9■□□□□ 0.78
CHD7Q9P2D1 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHD7Q9P2D1 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.9■□□□□ 0.78
CHD7Q9P2D1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHD7Q9P2D1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CHD7Q9P2D1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.9■□□□□ 0.78
CHD7Q9P2D1 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHD7Q9P2D1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHD7Q9P2D1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.9■□□□□ 0.78
CHD7Q9P2D1 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHD7Q9P2D1 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.9■□□□□ 0.78
CHD7Q9P2D1 AC027601.4-201ENST00000611259 610 ntBASIC19.9■□□□□ 0.78
CHD7Q9P2D1 AL691403.2-201ENST00000618460 490 ntBASIC19.9■□□□□ 0.78
CHD7Q9P2D1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHD7Q9P2D1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHD7Q9P2D1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CHD7Q9P2D1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHD7Q9P2D1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CHD7Q9P2D1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.9■□□□□ 0.78
CHD7Q9P2D1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.9■□□□□ 0.78
CHD7Q9P2D1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CHD7Q9P2D1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CHD7Q9P2D1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.89■□□□□ 0.78
CHD7Q9P2D1 AC098831.1-202ENST00000438821 336 ntBASIC19.89■□□□□ 0.78
CHD7Q9P2D1 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CHD7Q9P2D1 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.89■□□□□ 0.78
CHD7Q9P2D1 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.89■□□□□ 0.78
CHD7Q9P2D1 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
CHD7Q9P2D1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.89■□□□□ 0.78
CHD7Q9P2D1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.89■□□□□ 0.78
CHD7Q9P2D1 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHD7Q9P2D1 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHD7Q9P2D1 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.89■□□□□ 0.77
CHD7Q9P2D1 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.89■□□□□ 0.77
CHD7Q9P2D1 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.89■□□□□ 0.77
CHD7Q9P2D1 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.89■□□□□ 0.77
CHD7Q9P2D1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHD7Q9P2D1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHD7Q9P2D1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHD7Q9P2D1 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHD7Q9P2D1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHD7Q9P2D1 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHD7Q9P2D1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CHD7Q9P2D1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CHD7Q9P2D1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHD7Q9P2D1 AC099778.1-201ENST00000568593 1911 ntBASIC19.88■□□□□ 0.77
CHD7Q9P2D1 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.88■□□□□ 0.77
CHD7Q9P2D1 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHD7Q9P2D1 RPSAP43-201ENST00000402237 625 ntBASIC19.88■□□□□ 0.77
CHD7Q9P2D1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.88■□□□□ 0.77
CHD7Q9P2D1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.88■□□□□ 0.77
CHD7Q9P2D1 GPR32P1-201ENST00000601788 811 ntBASIC19.88■□□□□ 0.77
CHD7Q9P2D1 AL109659.2-201ENST00000606809 1674 ntBASIC19.88■□□□□ 0.77
CHD7Q9P2D1 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHD7Q9P2D1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.88■□□□□ 0.77
CHD7Q9P2D1 AC020907.5-201ENST00000624372 1936 ntBASIC19.88■□□□□ 0.77
CHD7Q9P2D1 KRT8P3-201ENST00000519669 1449 ntBASIC19.88■□□□□ 0.77
CHD7Q9P2D1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHD7Q9P2D1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHD7Q9P2D1 AC096582.2-201ENST00000510860 516 ntBASIC19.88■□□□□ 0.77
CHD7Q9P2D1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.88■□□□□ 0.77
CHD7Q9P2D1 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.88■□□□□ 0.77
CHD7Q9P2D1 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHD7Q9P2D1 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.88■□□□□ 0.77
CHD7Q9P2D1 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.88■□□□□ 0.77
CHD7Q9P2D1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHD7Q9P2D1 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.88■□□□□ 0.77
CHD7Q9P2D1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHD7Q9P2D1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHD7Q9P2D1 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.87■□□□□ 0.77
CHD7Q9P2D1 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHD7Q9P2D1 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHD7Q9P2D1 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.87■□□□□ 0.77
CHD7Q9P2D1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
CHD7Q9P2D1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CHD7Q9P2D1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms