Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.58■□□□□ 0.4
CNIH4Q9P003 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNIH4Q9P003 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CNIH4Q9P003 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH4Q9P003 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH4Q9P003 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH4Q9P003 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.57■□□□□ 0.4
CNIH4Q9P003 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.57■□□□□ 0.4
CNIH4Q9P003 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH4Q9P003 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH4Q9P003 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH4Q9P003 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH4Q9P003 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH4Q9P003 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.57■□□□□ 0.4
CNIH4Q9P003 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH4Q9P003 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH4Q9P003 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.57■□□□□ 0.4
CNIH4Q9P003 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH4Q9P003 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.57■□□□□ 0.4
CNIH4Q9P003 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.57■□□□□ 0.4
CNIH4Q9P003 AC145285.6-201ENST00000604632 637 ntBASIC17.57■□□□□ 0.4
CNIH4Q9P003 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH4Q9P003 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH4Q9P003 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH4Q9P003 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH4Q9P003 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH4Q9P003 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH4Q9P003 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH4Q9P003 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CNIH4Q9P003 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH4Q9P003 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.57■□□□□ 0.4
CNIH4Q9P003 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CNIH4Q9P003 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CNIH4Q9P003 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNIH4Q9P003 KRT8P9-201ENST00000558927 1449 ntBASIC17.56■□□□□ 0.4
CNIH4Q9P003 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
CNIH4Q9P003 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CNIH4Q9P003 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNIH4Q9P003 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNIH4Q9P003 LINC01568-207ENST00000641790 1380 ntBASIC17.56■□□□□ 0.4
CNIH4Q9P003 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNIH4Q9P003 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.56■□□□□ 0.4
CNIH4Q9P003 KRT18P22-201ENST00000402024 1347 ntBASIC17.56■□□□□ 0.4
CNIH4Q9P003 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNIH4Q9P003 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNIH4Q9P003 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNIH4Q9P003 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNIH4Q9P003 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.56■□□□□ 0.4
CNIH4Q9P003 EGLN1P1-201ENST00000531623 762 ntBASIC17.56■□□□□ 0.4
CNIH4Q9P003 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CNIH4Q9P003 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNIH4Q9P003 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.56■□□□□ 0.4
CNIH4Q9P003 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CNIH4Q9P003 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNIH4Q9P003 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNIH4Q9P003 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CNIH4Q9P003 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CNIH4Q9P003 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.56■□□□□ 0.4
CNIH4Q9P003 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CNIH4Q9P003 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.56■□□□□ 0.4
CNIH4Q9P003 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNIH4Q9P003 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH4Q9P003 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH4Q9P003 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH4Q9P003 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
CNIH4Q9P003 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH4Q9P003 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.55■□□□□ 0.4
CNIH4Q9P003 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH4Q9P003 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH4Q9P003 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH4Q9P003 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH4Q9P003 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.55■□□□□ 0.4
CNIH4Q9P003 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CNIH4Q9P003 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH4Q9P003 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CNIH4Q9P003 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH4Q9P003 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH4Q9P003 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CNIH4Q9P003 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH4Q9P003 TSPY14P-201ENST00000303979 915 ntBASIC17.55■□□□□ 0.4
CNIH4Q9P003 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.55■□□□□ 0.4
CNIH4Q9P003 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH4Q9P003 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH4Q9P003 TSPY21P-201ENST00000433481 731 ntBASIC17.55■□□□□ 0.4
CNIH4Q9P003 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH4Q9P003 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.55■□□□□ 0.4
CNIH4Q9P003 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH4Q9P003 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.55■□□□□ 0.4
CNIH4Q9P003 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.55■□□□□ 0.4
CNIH4Q9P003 CKBP1-201ENST00000565489 1086 ntBASIC17.55■□□□□ 0.4
CNIH4Q9P003 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.55■□□□□ 0.4
CNIH4Q9P003 AC010947.1-201ENST00000623454 693 ntBASIC17.55■□□□□ 0.4
CNIH4Q9P003 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH4Q9P003 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH4Q9P003 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CNIH4Q9P003 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH4Q9P003 CYP2D8P-201ENST00000433633 1490 ntBASIC17.55■□□□□ 0.4
CNIH4Q9P003 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH4Q9P003 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH4Q9P003 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms