Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.18■□□□□ 0.5
NDE1Q9NXR1 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.18■□□□□ 0.5
NDE1Q9NXR1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDE1Q9NXR1 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NDE1Q9NXR1 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NDE1Q9NXR1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDE1Q9NXR1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.18■□□□□ 0.5
NDE1Q9NXR1 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDE1Q9NXR1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.18■□□□□ 0.5
NDE1Q9NXR1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NDE1Q9NXR1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.18■□□□□ 0.5
NDE1Q9NXR1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
NDE1Q9NXR1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDE1Q9NXR1 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDE1Q9NXR1 PCDHA12-202ENST00000613593 2588 ntBASIC18.18■□□□□ 0.5
NDE1Q9NXR1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NDE1Q9NXR1 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NDE1Q9NXR1 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDE1Q9NXR1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NDE1Q9NXR1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NDE1Q9NXR1 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDE1Q9NXR1 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDE1Q9NXR1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NDE1Q9NXR1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NDE1Q9NXR1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDE1Q9NXR1 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NDE1Q9NXR1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDE1Q9NXR1 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDE1Q9NXR1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.18■□□□□ 0.5
NDE1Q9NXR1 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.18■□□□□ 0.5
NDE1Q9NXR1 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.18■□□□□ 0.5
NDE1Q9NXR1 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 AC134043.2-201ENST00000624206 2238 ntBASIC18.17■□□□□ 0.5
NDE1Q9NXR1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 AL390719.1-204ENST00000412397 1219 ntBASIC18.17■□□□□ 0.5
NDE1Q9NXR1 YBX1P10-201ENST00000444752 975 ntBASIC18.17■□□□□ 0.5
NDE1Q9NXR1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NDE1Q9NXR1 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDE1Q9NXR1 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDE1Q9NXR1 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDE1Q9NXR1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDE1Q9NXR1 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDE1Q9NXR1 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NDE1Q9NXR1 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
NDE1Q9NXR1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDE1Q9NXR1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.16■□□□□ 0.5
NDE1Q9NXR1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NDE1Q9NXR1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.16■□□□□ 0.5
NDE1Q9NXR1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDE1Q9NXR1 AC073210.2-201ENST00000430369 194 ntBASIC18.16■□□□□ 0.5
NDE1Q9NXR1 SLC25A6P5-201ENST00000435663 894 ntBASIC18.16■□□□□ 0.5
NDE1Q9NXR1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDE1Q9NXR1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.16■□□□□ 0.5
NDE1Q9NXR1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDE1Q9NXR1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDE1Q9NXR1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
NDE1Q9NXR1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDE1Q9NXR1 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDE1Q9NXR1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
NDE1Q9NXR1 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDE1Q9NXR1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDE1Q9NXR1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NDE1Q9NXR1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDE1Q9NXR1 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NDE1Q9NXR1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDE1Q9NXR1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDE1Q9NXR1 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDE1Q9NXR1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.16■□□□□ 0.5
NDE1Q9NXR1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms