Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PARPBPQ9NWS1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PARPBPQ9NWS1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PARPBPQ9NWS1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 KRT18P22-201ENST00000402024 1347 ntBASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 AC087499.1-201ENST00000418141 1075 ntBASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
PARPBPQ9NWS1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.8■□□□□ 0.28
PARPBPQ9NWS1 KRT8P3-201ENST00000519669 1449 ntBASIC16.8■□□□□ 0.28
PARPBPQ9NWS1 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PARPBPQ9NWS1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PARPBPQ9NWS1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PARPBPQ9NWS1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PARPBPQ9NWS1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PARPBPQ9NWS1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
PARPBPQ9NWS1 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PARPBPQ9NWS1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PARPBPQ9NWS1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PARPBPQ9NWS1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PARPBPQ9NWS1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PARPBPQ9NWS1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PARPBPQ9NWS1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PARPBPQ9NWS1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.8■□□□□ 0.28
PARPBPQ9NWS1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.8■□□□□ 0.28
PARPBPQ9NWS1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PARPBPQ9NWS1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PARPBPQ9NWS1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PARPBPQ9NWS1 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PARPBPQ9NWS1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PARPBPQ9NWS1 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PARPBPQ9NWS1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PARPBPQ9NWS1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PARPBPQ9NWS1 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PARPBPQ9NWS1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PARPBPQ9NWS1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PARPBPQ9NWS1 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 LINC01568-207ENST00000641790 1380 ntBASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 AL353719.1-201ENST00000566847 864 ntBASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 AC010947.1-201ENST00000623454 693 ntBASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 AC010653.2-201ENST00000623505 997 ntBASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PARPBPQ9NWS1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms