Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AC011558.1-201ENST00000623459 338 ntBASIC19.39■□□□□ 0.69
VPS45Q9NRW7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.39■□□□□ 0.69
VPS45Q9NRW7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
VPS45Q9NRW7 FEM1AP3-201ENST00000403722 1741 ntBASIC19.39■□□□□ 0.69
VPS45Q9NRW7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
VPS45Q9NRW7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
VPS45Q9NRW7 IRX1P1-201ENST00000438849 1838 ntBASIC19.39■□□□□ 0.69
VPS45Q9NRW7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.39■□□□□ 0.69
VPS45Q9NRW7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
VPS45Q9NRW7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.39■□□□□ 0.69
VPS45Q9NRW7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
VPS45Q9NRW7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS45Q9NRW7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS45Q9NRW7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
VPS45Q9NRW7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS45Q9NRW7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VPS45Q9NRW7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
VPS45Q9NRW7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS45Q9NRW7 AC004951.3-201ENST00000418645 1148 ntBASIC19.38■□□□□ 0.69
VPS45Q9NRW7 AC007663.1-201ENST00000438948 1240 ntBASIC19.38■□□□□ 0.69
VPS45Q9NRW7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.38■□□□□ 0.69
VPS45Q9NRW7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.38■□□□□ 0.69
VPS45Q9NRW7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VPS45Q9NRW7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VPS45Q9NRW7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.38■□□□□ 0.69
VPS45Q9NRW7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.38■□□□□ 0.69
VPS45Q9NRW7 AC096733.2-201ENST00000609937 1394 ntBASIC19.38■□□□□ 0.69
VPS45Q9NRW7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS45Q9NRW7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VPS45Q9NRW7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VPS45Q9NRW7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.37■□□□□ 0.69
VPS45Q9NRW7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VPS45Q9NRW7 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.37■□□□□ 0.69
VPS45Q9NRW7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.37■□□□□ 0.69
VPS45Q9NRW7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.37■□□□□ 0.69
VPS45Q9NRW7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS45Q9NRW7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
VPS45Q9NRW7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS45Q9NRW7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VPS45Q9NRW7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS45Q9NRW7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.37■□□□□ 0.69
VPS45Q9NRW7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.37■□□□□ 0.69
VPS45Q9NRW7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.37■□□□□ 0.69
VPS45Q9NRW7 HCG4P8-203ENST00000443049 980 ntBASIC19.37■□□□□ 0.69
VPS45Q9NRW7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.37■□□□□ 0.69
VPS45Q9NRW7 AL691432.3-201ENST00000621860 400 ntBASIC19.37■□□□□ 0.69
VPS45Q9NRW7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS45Q9NRW7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VPS45Q9NRW7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VPS45Q9NRW7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VPS45Q9NRW7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS45Q9NRW7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS45Q9NRW7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS45Q9NRW7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
VPS45Q9NRW7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
VPS45Q9NRW7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.36■□□□□ 0.69
VPS45Q9NRW7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS45Q9NRW7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS45Q9NRW7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.36■□□□□ 0.69
VPS45Q9NRW7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
VPS45Q9NRW7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.36■□□□□ 0.69
VPS45Q9NRW7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS45Q9NRW7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.36■□□□□ 0.69
VPS45Q9NRW7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS45Q9NRW7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
VPS45Q9NRW7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
VPS45Q9NRW7 TSPY23P-201ENST00000440136 739 ntBASIC19.36■□□□□ 0.69
VPS45Q9NRW7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VPS45Q9NRW7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
VPS45Q9NRW7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VPS45Q9NRW7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.36■□□□□ 0.69
VPS45Q9NRW7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.36■□□□□ 0.69
VPS45Q9NRW7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.36■□□□□ 0.69
VPS45Q9NRW7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.36■□□□□ 0.69
VPS45Q9NRW7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.36■□□□□ 0.69
VPS45Q9NRW7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VPS45Q9NRW7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
VPS45Q9NRW7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS45Q9NRW7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
VPS45Q9NRW7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.36■□□□□ 0.69
VPS45Q9NRW7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS45Q9NRW7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.35■□□□□ 0.69
VPS45Q9NRW7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms