Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 USP31-203ENST00000567975 2142 ntTSL 2 BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 CICP13-201ENST00000422015 2789 ntBASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 AP001094.4-201ENST00000579008 2176 ntBASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
CDC42SE1Q9NRR8 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
CDC42SE1Q9NRR8 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
CDC42SE1Q9NRR8 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC9.65□□□□□ -0.87
CDC42SE1Q9NRR8 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
CDC42SE1Q9NRR8 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
CDC42SE1Q9NRR8 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
CDC42SE1Q9NRR8 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.87
CDC42SE1Q9NRR8 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
CDC42SE1Q9NRR8 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
CDC42SE1Q9NRR8 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
CDC42SE1Q9NRR8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
CDC42SE1Q9NRR8 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
CDC42SE1Q9NRR8 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
CDC42SE1Q9NRR8 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
CDC42SE1Q9NRR8 BANP-204ENST00000393208 2283 ntTSL 2 BASIC9.65□□□□□ -0.87
CDC42SE1Q9NRR8 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 CASK-202ENST00000378158 3848 ntTSL 5 BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 AL161938.1-201ENST00000569833 2180 ntBASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 POR-209ENST00000439269 1858 ntTSL 2 BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 LYSMD4-203ENST00000378904 2122 ntBASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 AC024909.3-201ENST00000611513 2257 ntBASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42SE1Q9NRR8 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms