Protein–RNA interactions for Protein: Q9NPR2

SEMA4B, Semaphorin-4B, humanhuman

Predicted RBP Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4BQ9NPR2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.39■□□□□ 0.54
SEMA4BQ9NPR2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
SEMA4BQ9NPR2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SEMA4BQ9NPR2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SEMA4BQ9NPR2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
SEMA4BQ9NPR2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SEMA4BQ9NPR2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SEMA4BQ9NPR2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SEMA4BQ9NPR2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SEMA4BQ9NPR2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SEMA4BQ9NPR2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SEMA4BQ9NPR2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.39■□□□□ 0.53
SEMA4BQ9NPR2 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SEMA4BQ9NPR2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.39■□□□□ 0.53
SEMA4BQ9NPR2 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.39■□□□□ 0.53
SEMA4BQ9NPR2 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.39■□□□□ 0.53
SEMA4BQ9NPR2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.39■□□□□ 0.53
SEMA4BQ9NPR2 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.39■□□□□ 0.53
SEMA4BQ9NPR2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SEMA4BQ9NPR2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SEMA4BQ9NPR2 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SEMA4BQ9NPR2 AC131212.4-201ENST00000623606 975 ntBASIC18.39■□□□□ 0.53
SEMA4BQ9NPR2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SEMA4BQ9NPR2 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.39■□□□□ 0.53
SEMA4BQ9NPR2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.39■□□□□ 0.53
SEMA4BQ9NPR2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SEMA4BQ9NPR2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SEMA4BQ9NPR2 KRT8P11-201ENST00000409686 1436 ntBASIC18.39■□□□□ 0.53
SEMA4BQ9NPR2 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.39■□□□□ 0.53
SEMA4BQ9NPR2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SEMA4BQ9NPR2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SEMA4BQ9NPR2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4BQ9NPR2 AC018470.1-201ENST00000624790 3129 ntBASIC18.38■□□□□ 0.53
SEMA4BQ9NPR2 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4BQ9NPR2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.38■□□□□ 0.53
SEMA4BQ9NPR2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.38■□□□□ 0.53
SEMA4BQ9NPR2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4BQ9NPR2 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4BQ9NPR2 AL390961.4-201ENST00000623958 2535 ntBASIC18.38■□□□□ 0.53
SEMA4BQ9NPR2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4BQ9NPR2 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4BQ9NPR2 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SEMA4BQ9NPR2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4BQ9NPR2 NIFKP9-201ENST00000419265 221 ntBASIC18.38■□□□□ 0.53
SEMA4BQ9NPR2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.38■□□□□ 0.53
SEMA4BQ9NPR2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.38■□□□□ 0.53
SEMA4BQ9NPR2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4BQ9NPR2 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
SEMA4BQ9NPR2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.38■□□□□ 0.53
SEMA4BQ9NPR2 HTR7P1-201ENST00000538670 1336 ntBASIC18.38■□□□□ 0.53
SEMA4BQ9NPR2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4BQ9NPR2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4BQ9NPR2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4BQ9NPR2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4BQ9NPR2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.38■□□□□ 0.53
SEMA4BQ9NPR2 AC126763.1-201ENST00000552015 2118 ntBASIC18.38■□□□□ 0.53
SEMA4BQ9NPR2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.38■□□□□ 0.53
SEMA4BQ9NPR2 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.38■□□□□ 0.53
SEMA4BQ9NPR2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4BQ9NPR2 RCC2P6-201ENST00000526625 1557 ntBASIC18.38■□□□□ 0.53
SEMA4BQ9NPR2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4BQ9NPR2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 AC004980.1-204ENST00000429707 299 ntBASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 GCSHP5-201ENST00000443090 522 ntBASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 AL158047.1-201ENST00000445918 881 ntBASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 RPS2P4-201ENST00000476944 856 ntBASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 AP002982.1-201ENST00000492365 877 ntBASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 C1QBPP2-201ENST00000528754 825 ntBASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 HEIH-201ENST00000623091 1652 ntBASIC18.37■□□□□ 0.53
SEMA4BQ9NPR2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms