Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHD8Q9HCK8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHD8Q9HCK8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.46■□□□□ 0.39
CHD8Q9HCK8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CHD8Q9HCK8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CHD8Q9HCK8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CHD8Q9HCK8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.46■□□□□ 0.38
CHD8Q9HCK8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
CHD8Q9HCK8 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 PRSS29P-201ENST00000440800 595 ntBASIC17.45■□□□□ 0.38
CHD8Q9HCK8 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 AL139400.1-201ENST00000366220 510 ntBASIC17.45■□□□□ 0.38
CHD8Q9HCK8 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHD8Q9HCK8 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHD8Q9HCK8 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHD8Q9HCK8 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHD8Q9HCK8 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.44■□□□□ 0.38
CHD8Q9HCK8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHD8Q9HCK8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CHD8Q9HCK8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.44■□□□□ 0.38
CHD8Q9HCK8 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CHD8Q9HCK8 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.44■□□□□ 0.38
CHD8Q9HCK8 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.44■□□□□ 0.38
CHD8Q9HCK8 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.44■□□□□ 0.38
CHD8Q9HCK8 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.44■□□□□ 0.38
CHD8Q9HCK8 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.44■□□□□ 0.38
CHD8Q9HCK8 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.44■□□□□ 0.38
CHD8Q9HCK8 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.44■□□□□ 0.38
CHD8Q9HCK8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHD8Q9HCK8 HOXB1-202ENST00000577092 1414 ntBASIC17.44■□□□□ 0.38
CHD8Q9HCK8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHD8Q9HCK8 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHD8Q9HCK8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHD8Q9HCK8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHD8Q9HCK8 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHD8Q9HCK8 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.44■□□□□ 0.38
CHD8Q9HCK8 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.43■□□□□ 0.38
CHD8Q9HCK8 MIR4745-201ENST00000577608 62 ntBASIC17.43■□□□□ 0.38
CHD8Q9HCK8 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.43■□□□□ 0.38
CHD8Q9HCK8 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.43■□□□□ 0.38
CHD8Q9HCK8 C20orf181-201ENST00000623918 480 ntBASIC17.43■□□□□ 0.38
CHD8Q9HCK8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.43■□□□□ 0.38
CHD8Q9HCK8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHD8Q9HCK8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CHD8Q9HCK8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CHD8Q9HCK8 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.43■□□□□ 0.38
CHD8Q9HCK8 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.43■□□□□ 0.38
CHD8Q9HCK8 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHD8Q9HCK8 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.43■□□□□ 0.38
CHD8Q9HCK8 OR7E14P-202ENST00000530490 1290 ntBASIC17.43■□□□□ 0.38
CHD8Q9HCK8 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.43■□□□□ 0.38
CHD8Q9HCK8 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.43■□□□□ 0.38
CHD8Q9HCK8 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.43■□□□□ 0.38
CHD8Q9HCK8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHD8Q9HCK8 AC079834.2-201ENST00000609776 1949 ntBASIC17.43■□□□□ 0.38
CHD8Q9HCK8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CHD8Q9HCK8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHD8Q9HCK8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHD8Q9HCK8 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHD8Q9HCK8 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHD8Q9HCK8 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
CHD8Q9HCK8 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CHD8Q9HCK8 AL353692.3-201ENST00000407031 1396 ntBASIC17.42■□□□□ 0.38
CHD8Q9HCK8 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.42■□□□□ 0.38
CHD8Q9HCK8 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHD8Q9HCK8 AC005498.2-205ENST00000593218 784 ntBASIC17.42■□□□□ 0.38
CHD8Q9HCK8 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms