Protein–RNA interactions for Protein: Q9HBW1

LRRC4, Leucine-rich repeat-containing protein 4, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4Q9HBW1 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC4Q9HBW1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.8■□□□□ 0.76
LRRC4Q9HBW1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
LRRC4Q9HBW1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC4Q9HBW1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC4Q9HBW1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC4Q9HBW1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC4Q9HBW1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.79■□□□□ 0.76
LRRC4Q9HBW1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.79■□□□□ 0.76
LRRC4Q9HBW1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
LRRC4Q9HBW1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC4Q9HBW1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC4Q9HBW1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC4Q9HBW1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC4Q9HBW1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC4Q9HBW1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC4Q9HBW1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC4Q9HBW1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.79■□□□□ 0.76
LRRC4Q9HBW1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC4Q9HBW1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC4Q9HBW1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC4Q9HBW1 AC005521.1-201ENST00000393351 872 ntBASIC19.79■□□□□ 0.76
LRRC4Q9HBW1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
LRRC4Q9HBW1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.79■□□□□ 0.76
LRRC4Q9HBW1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.79■□□□□ 0.76
LRRC4Q9HBW1 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.79■□□□□ 0.76
LRRC4Q9HBW1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC4Q9HBW1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC4Q9HBW1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC4Q9HBW1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LRRC4Q9HBW1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC4Q9HBW1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
LRRC4Q9HBW1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC4Q9HBW1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC4Q9HBW1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC4Q9HBW1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 KRT8P45-201ENST00000414328 1447 ntBASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 AC010203.1-204ENST00000548782 407 ntBASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 AL109659.2-201ENST00000606809 1674 ntBASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC4Q9HBW1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC4Q9HBW1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.77■□□□□ 0.76
LRRC4Q9HBW1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC4Q9HBW1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
LRRC4Q9HBW1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
LRRC4Q9HBW1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC4Q9HBW1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.77■□□□□ 0.76
LRRC4Q9HBW1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC4Q9HBW1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC4Q9HBW1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.77■□□□□ 0.76
LRRC4Q9HBW1 TERF1P1-201ENST00000311003 1181 ntBASIC19.77■□□□□ 0.76
LRRC4Q9HBW1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC4Q9HBW1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC4Q9HBW1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC4Q9HBW1 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.77■□□□□ 0.76
LRRC4Q9HBW1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
LRRC4Q9HBW1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC4Q9HBW1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.77■□□□□ 0.76
LRRC4Q9HBW1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC4Q9HBW1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
LRRC4Q9HBW1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.77■□□□□ 0.75
LRRC4Q9HBW1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC4Q9HBW1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.76■□□□□ 0.75
LRRC4Q9HBW1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC4Q9HBW1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
LRRC4Q9HBW1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
LRRC4Q9HBW1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.76■□□□□ 0.75
LRRC4Q9HBW1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC4Q9HBW1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms