Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.97■□□□□ 0.47
BRF2Q9HAW0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BRF2Q9HAW0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
BRF2Q9HAW0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BRF2Q9HAW0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.97■□□□□ 0.47
BRF2Q9HAW0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BRF2Q9HAW0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BRF2Q9HAW0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.97■□□□□ 0.47
BRF2Q9HAW0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.97■□□□□ 0.47
BRF2Q9HAW0 AC112777.1-201ENST00000540175 1423 ntBASIC17.97■□□□□ 0.47
BRF2Q9HAW0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BRF2Q9HAW0 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
BRF2Q9HAW0 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.97■□□□□ 0.47
BRF2Q9HAW0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
BRF2Q9HAW0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BRF2Q9HAW0 AL109659.2-201ENST00000606809 1674 ntBASIC17.96■□□□□ 0.47
BRF2Q9HAW0 AL357033.4-201ENST00000617703 1807 ntBASIC17.96■□□□□ 0.47
BRF2Q9HAW0 NEFHP1-201ENST00000412845 2629 ntBASIC17.96■□□□□ 0.47
BRF2Q9HAW0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BRF2Q9HAW0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
BRF2Q9HAW0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
BRF2Q9HAW0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BRF2Q9HAW0 MFAP1P1-201ENST00000442257 1255 ntBASIC17.96■□□□□ 0.47
BRF2Q9HAW0 CA15P1-201ENST00000481698 905 ntBASIC17.96■□□□□ 0.47
BRF2Q9HAW0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BRF2Q9HAW0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.96■□□□□ 0.47
BRF2Q9HAW0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BRF2Q9HAW0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BRF2Q9HAW0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BRF2Q9HAW0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.96■□□□□ 0.47
BRF2Q9HAW0 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.96■□□□□ 0.47
BRF2Q9HAW0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
BRF2Q9HAW0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BRF2Q9HAW0 KRT8P45-201ENST00000414328 1447 ntBASIC17.96■□□□□ 0.47
BRF2Q9HAW0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BRF2Q9HAW0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
BRF2Q9HAW0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BRF2Q9HAW0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.96■□□□□ 0.46
BRF2Q9HAW0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.96■□□□□ 0.46
BRF2Q9HAW0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRF2Q9HAW0 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
BRF2Q9HAW0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRF2Q9HAW0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
BRF2Q9HAW0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.95■□□□□ 0.46
BRF2Q9HAW0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.95■□□□□ 0.46
BRF2Q9HAW0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.95■□□□□ 0.46
BRF2Q9HAW0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.95■□□□□ 0.46
BRF2Q9HAW0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.95■□□□□ 0.46
BRF2Q9HAW0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.95■□□□□ 0.46
BRF2Q9HAW0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.95■□□□□ 0.46
BRF2Q9HAW0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.95■□□□□ 0.46
BRF2Q9HAW0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.95■□□□□ 0.46
BRF2Q9HAW0 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.95■□□□□ 0.46
BRF2Q9HAW0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BRF2Q9HAW0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.95■□□□□ 0.46
BRF2Q9HAW0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.95■□□□□ 0.46
BRF2Q9HAW0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BRF2Q9HAW0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRF2Q9HAW0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRF2Q9HAW0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
BRF2Q9HAW0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
BRF2Q9HAW0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRF2Q9HAW0 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.95■□□□□ 0.46
BRF2Q9HAW0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BRF2Q9HAW0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.94■□□□□ 0.46
BRF2Q9HAW0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.94■□□□□ 0.46
BRF2Q9HAW0 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BRF2Q9HAW0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
BRF2Q9HAW0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRF2Q9HAW0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRF2Q9HAW0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BRF2Q9HAW0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.94■□□□□ 0.46
BRF2Q9HAW0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.94■□□□□ 0.46
BRF2Q9HAW0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BRF2Q9HAW0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.94■□□□□ 0.46
BRF2Q9HAW0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.94■□□□□ 0.46
BRF2Q9HAW0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRF2Q9HAW0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.94■□□□□ 0.46
BRF2Q9HAW0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BRF2Q9HAW0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.94■□□□□ 0.46
BRF2Q9HAW0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
BRF2Q9HAW0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
BRF2Q9HAW0 AL355355.2-201ENST00000442321 338 ntBASIC17.94■□□□□ 0.46
BRF2Q9HAW0 AC097488.1-201ENST00000507834 756 ntBASIC17.94■□□□□ 0.46
BRF2Q9HAW0 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.94■□□□□ 0.46
BRF2Q9HAW0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.94■□□□□ 0.46
BRF2Q9HAW0 SLC25A1P4-201ENST00000567977 778 ntBASIC17.94■□□□□ 0.46
BRF2Q9HAW0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.94■□□□□ 0.46
BRF2Q9HAW0 REXO1L10P-201ENST00000615707 1290 ntBASIC17.94■□□□□ 0.46
BRF2Q9HAW0 REXO1L12P-201ENST00000622156 912 ntBASIC17.94■□□□□ 0.46
BRF2Q9HAW0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.94■□□□□ 0.46
BRF2Q9HAW0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRF2Q9HAW0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.94■□□□□ 0.46
BRF2Q9HAW0 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRF2Q9HAW0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.94■□□□□ 0.46
BRF2Q9HAW0 AC135050.7-201ENST00000624508 2218 ntBASIC17.94■□□□□ 0.46
BRF2Q9HAW0 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
BRF2Q9HAW0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.94■□□□□ 0.46
BRF2Q9HAW0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRF2Q9HAW0 AC126763.1-201ENST00000552015 2118 ntBASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms