Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ATXN3LQ9H3M9 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.71■□□□□ 0.75
ATXN3LQ9H3M9 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.71■□□□□ 0.75
ATXN3LQ9H3M9 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.71■□□□□ 0.75
ATXN3LQ9H3M9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATXN3LQ9H3M9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
ATXN3LQ9H3M9 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
ATXN3LQ9H3M9 AC024243.1-201ENST00000609234 778 ntBASIC19.71■□□□□ 0.75
ATXN3LQ9H3M9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATXN3LQ9H3M9 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.71■□□□□ 0.75
ATXN3LQ9H3M9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATXN3LQ9H3M9 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.71■□□□□ 0.75
ATXN3LQ9H3M9 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
ATXN3LQ9H3M9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.71■□□□□ 0.75
ATXN3LQ9H3M9 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATXN3LQ9H3M9 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ATXN3LQ9H3M9 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
ATXN3LQ9H3M9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.7■□□□□ 0.74
ATXN3LQ9H3M9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.7■□□□□ 0.74
ATXN3LQ9H3M9 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
ATXN3LQ9H3M9 KRT8P3-201ENST00000519669 1449 ntBASIC19.7■□□□□ 0.74
ATXN3LQ9H3M9 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATXN3LQ9H3M9 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATXN3LQ9H3M9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATXN3LQ9H3M9 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.7■□□□□ 0.74
ATXN3LQ9H3M9 AC034232.1-201ENST00000506026 1064 ntBASIC19.7■□□□□ 0.74
ATXN3LQ9H3M9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATXN3LQ9H3M9 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.7■□□□□ 0.74
ATXN3LQ9H3M9 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
ATXN3LQ9H3M9 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATXN3LQ9H3M9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATXN3LQ9H3M9 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATXN3LQ9H3M9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ATXN3LQ9H3M9 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATXN3LQ9H3M9 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATXN3LQ9H3M9 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATXN3LQ9H3M9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.7■□□□□ 0.74
ATXN3LQ9H3M9 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.7■□□□□ 0.74
ATXN3LQ9H3M9 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
ATXN3LQ9H3M9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATXN3LQ9H3M9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
ATXN3LQ9H3M9 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATXN3LQ9H3M9 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ATXN3LQ9H3M9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATXN3LQ9H3M9 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ATXN3LQ9H3M9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATXN3LQ9H3M9 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATXN3LQ9H3M9 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATXN3LQ9H3M9 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATXN3LQ9H3M9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATXN3LQ9H3M9 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
ATXN3LQ9H3M9 RASA4DP-201ENST00000460726 1199 ntBASIC19.69■□□□□ 0.74
ATXN3LQ9H3M9 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.69■□□□□ 0.74
ATXN3LQ9H3M9 MIR3180-5-201ENST00000583743 153 ntBASIC19.69■□□□□ 0.74
ATXN3LQ9H3M9 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.69■□□□□ 0.74
ATXN3LQ9H3M9 AC069148.1-201ENST00000608741 768 ntBASIC19.69■□□□□ 0.74
ATXN3LQ9H3M9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATXN3LQ9H3M9 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATXN3LQ9H3M9 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATXN3LQ9H3M9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATXN3LQ9H3M9 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATXN3LQ9H3M9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATXN3LQ9H3M9 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATXN3LQ9H3M9 AC120498.9-201ENST00000339021 3867 ntBASIC19.69■□□□□ 0.74
ATXN3LQ9H3M9 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.69■□□□□ 0.74
ATXN3LQ9H3M9 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATXN3LQ9H3M9 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.68■□□□□ 0.74
ATXN3LQ9H3M9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATXN3LQ9H3M9 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.68■□□□□ 0.74
ATXN3LQ9H3M9 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATXN3LQ9H3M9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.68■□□□□ 0.74
ATXN3LQ9H3M9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.68■□□□□ 0.74
ATXN3LQ9H3M9 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.68■□□□□ 0.74
ATXN3LQ9H3M9 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.68■□□□□ 0.74
ATXN3LQ9H3M9 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.68■□□□□ 0.74
ATXN3LQ9H3M9 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATXN3LQ9H3M9 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.68■□□□□ 0.74
ATXN3LQ9H3M9 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ATXN3LQ9H3M9 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATXN3LQ9H3M9 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.68■□□□□ 0.74
ATXN3LQ9H3M9 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.68■□□□□ 0.74
ATXN3LQ9H3M9 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
ATXN3LQ9H3M9 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.68■□□□□ 0.74
ATXN3LQ9H3M9 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.68■□□□□ 0.74
ATXN3LQ9H3M9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATXN3LQ9H3M9 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
ATXN3LQ9H3M9 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATXN3LQ9H3M9 AC005332.7-201ENST00000614046 2005 ntBASIC19.68■□□□□ 0.74
ATXN3LQ9H3M9 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ATXN3LQ9H3M9 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATXN3LQ9H3M9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.67■□□□□ 0.74
ATXN3LQ9H3M9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.67■□□□□ 0.74
ATXN3LQ9H3M9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.67■□□□□ 0.74
ATXN3LQ9H3M9 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATXN3LQ9H3M9 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.67■□□□□ 0.74
ATXN3LQ9H3M9 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ATXN3LQ9H3M9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATXN3LQ9H3M9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATXN3LQ9H3M9 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATXN3LQ9H3M9 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms