Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.47■□□□□ 0.87
KCNF1Q9H3M0 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
KCNF1Q9H3M0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
KCNF1Q9H3M0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.47■□□□□ 0.87
KCNF1Q9H3M0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KCNF1Q9H3M0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
KCNF1Q9H3M0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KCNF1Q9H3M0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KCNF1Q9H3M0 AC011676.5-201ENST00000624864 2660 ntBASIC20.47■□□□□ 0.87
KCNF1Q9H3M0 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
KCNF1Q9H3M0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.47■□□□□ 0.87
KCNF1Q9H3M0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNF1Q9H3M0 RCC2P6-201ENST00000526625 1557 ntBASIC20.46■□□□□ 0.87
KCNF1Q9H3M0 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
KCNF1Q9H3M0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.46■□□□□ 0.87
KCNF1Q9H3M0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
KCNF1Q9H3M0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KCNF1Q9H3M0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.46■□□□□ 0.87
KCNF1Q9H3M0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNF1Q9H3M0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNF1Q9H3M0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNF1Q9H3M0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNF1Q9H3M0 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNF1Q9H3M0 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.46■□□□□ 0.87
KCNF1Q9H3M0 AC069236.1-201ENST00000604339 616 ntBASIC20.46■□□□□ 0.87
KCNF1Q9H3M0 AL139246.5-201ENST00000606645 996 ntBASIC20.46■□□□□ 0.87
KCNF1Q9H3M0 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNF1Q9H3M0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KCNF1Q9H3M0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
KCNF1Q9H3M0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNF1Q9H3M0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
KCNF1Q9H3M0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.46■□□□□ 0.87
KCNF1Q9H3M0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
KCNF1Q9H3M0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.46■□□□□ 0.87
KCNF1Q9H3M0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNF1Q9H3M0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNF1Q9H3M0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.45■□□□□ 0.87
KCNF1Q9H3M0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 TSPY21P-201ENST00000433481 731 ntBASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 AC093787.1-201ENST00000450396 207 ntBASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 KRT18P16-201ENST00000510337 1294 ntBASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 AC068587.9-201ENST00000641814 219 ntBASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.45■□□□□ 0.86
KCNF1Q9H3M0 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNF1Q9H3M0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KCNF1Q9H3M0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNF1Q9H3M0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNF1Q9H3M0 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
KCNF1Q9H3M0 AC008556.1-201ENST00000610908 2040 ntBASIC20.44■□□□□ 0.86
KCNF1Q9H3M0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KCNF1Q9H3M0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNF1Q9H3M0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNF1Q9H3M0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNF1Q9H3M0 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNF1Q9H3M0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNF1Q9H3M0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNF1Q9H3M0 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNF1Q9H3M0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.44■□□□□ 0.86
KCNF1Q9H3M0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
KCNF1Q9H3M0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
KCNF1Q9H3M0 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.44■□□□□ 0.86
KCNF1Q9H3M0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNF1Q9H3M0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
KCNF1Q9H3M0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNF1Q9H3M0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.44■□□□□ 0.86
KCNF1Q9H3M0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.44■□□□□ 0.86
KCNF1Q9H3M0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNF1Q9H3M0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KCNF1Q9H3M0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.44■□□□□ 0.86
KCNF1Q9H3M0 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
KCNF1Q9H3M0 AC011767.1-201ENST00000617410 1153 ntBASIC20.44■□□□□ 0.86
KCNF1Q9H3M0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms