Protein–RNA interactions for Protein: Q9H2X0

CHRD, Chordin, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDQ9H2X0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHRDQ9H2X0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHRDQ9H2X0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRDQ9H2X0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHRDQ9H2X0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CHRDQ9H2X0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CHRDQ9H2X0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRDQ9H2X0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRDQ9H2X0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRDQ9H2X0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRDQ9H2X0 MIR574-201ENST00000385209 96 ntBASIC18.82■□□□□ 0.6
CHRDQ9H2X0 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CHRDQ9H2X0 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CHRDQ9H2X0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.82■□□□□ 0.6
CHRDQ9H2X0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CHRDQ9H2X0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.82■□□□□ 0.6
CHRDQ9H2X0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.82■□□□□ 0.6
CHRDQ9H2X0 RNA5SP419-201ENST00000515908 135 ntBASIC18.82■□□□□ 0.6
CHRDQ9H2X0 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CHRDQ9H2X0 AF238378.1-201ENST00000526806 358 ntBASIC18.82■□□□□ 0.6
CHRDQ9H2X0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.82■□□□□ 0.6
CHRDQ9H2X0 MIR3180-4-201ENST00000582223 153 ntBASIC18.82■□□□□ 0.6
CHRDQ9H2X0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.82■□□□□ 0.6
CHRDQ9H2X0 NSUN5P1-202ENST00000421140 1535 ntBASIC18.82■□□□□ 0.6
CHRDQ9H2X0 NSUN5P2-203ENST00000457352 1529 ntBASIC18.82■□□□□ 0.6
CHRDQ9H2X0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRDQ9H2X0 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CHRDQ9H2X0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHRDQ9H2X0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRDQ9H2X0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRDQ9H2X0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.82■□□□□ 0.6
CHRDQ9H2X0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRDQ9H2X0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHRDQ9H2X0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRDQ9H2X0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.81■□□□□ 0.6
CHRDQ9H2X0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHRDQ9H2X0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRDQ9H2X0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRDQ9H2X0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRDQ9H2X0 AL512353.2-201ENST00000448759 1962 ntBASIC18.81■□□□□ 0.6
CHRDQ9H2X0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRDQ9H2X0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRDQ9H2X0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.81■□□□□ 0.6
CHRDQ9H2X0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRDQ9H2X0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRDQ9H2X0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.81■□□□□ 0.6
CHRDQ9H2X0 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.81■□□□□ 0.6
CHRDQ9H2X0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.81■□□□□ 0.6
CHRDQ9H2X0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.81■□□□□ 0.6
CHRDQ9H2X0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.81■□□□□ 0.6
CHRDQ9H2X0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.81■□□□□ 0.6
CHRDQ9H2X0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.81■□□□□ 0.6
CHRDQ9H2X0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHRDQ9H2X0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.81■□□□□ 0.6
CHRDQ9H2X0 AC124864.1-201ENST00000623408 392 ntBASIC18.81■□□□□ 0.6
CHRDQ9H2X0 TP73-AS1-207ENST00000624167 988 ntBASIC18.81■□□□□ 0.6
CHRDQ9H2X0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.81■□□□□ 0.6
CHRDQ9H2X0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.81■□□□□ 0.6
CHRDQ9H2X0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
CHRDQ9H2X0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CHRDQ9H2X0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHRDQ9H2X0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.81■□□□□ 0.6
CHRDQ9H2X0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.8■□□□□ 0.6
CHRDQ9H2X0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRDQ9H2X0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRDQ9H2X0 IL9RP2-201ENST00000423948 1312 ntBASIC18.8■□□□□ 0.6
CHRDQ9H2X0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHRDQ9H2X0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHRDQ9H2X0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CHRDQ9H2X0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CHRDQ9H2X0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRDQ9H2X0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHRDQ9H2X0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRDQ9H2X0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.8■□□□□ 0.6
CHRDQ9H2X0 NUS1P2-201ENST00000417358 873 ntBASIC18.8■□□□□ 0.6
CHRDQ9H2X0 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.8■□□□□ 0.6
CHRDQ9H2X0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.8■□□□□ 0.6
CHRDQ9H2X0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.8■□□□□ 0.6
CHRDQ9H2X0 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CHRDQ9H2X0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.8■□□□□ 0.6
CHRDQ9H2X0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CHRDQ9H2X0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRDQ9H2X0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.8■□□□□ 0.6
CHRDQ9H2X0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRDQ9H2X0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRDQ9H2X0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.8■□□□□ 0.6
CHRDQ9H2X0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRDQ9H2X0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHRDQ9H2X0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHRDQ9H2X0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CHRDQ9H2X0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRDQ9H2X0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.8■□□□□ 0.6
CHRDQ9H2X0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.79■□□□□ 0.6
CHRDQ9H2X0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHRDQ9H2X0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRDQ9H2X0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHRDQ9H2X0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRDQ9H2X0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRDQ9H2X0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRDQ9H2X0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms