Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC68Q9H2F9 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CCDC68Q9H2F9 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC68Q9H2F9 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC68Q9H2F9 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC68Q9H2F9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC68Q9H2F9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC68Q9H2F9 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC68Q9H2F9 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC68Q9H2F9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CCDC68Q9H2F9 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC68Q9H2F9 AC004951.3-201ENST00000418645 1148 ntBASIC18.84■□□□□ 0.61
CCDC68Q9H2F9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC68Q9H2F9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC68Q9H2F9 PRSS44-201ENST00000515154 1146 ntBASIC18.84■□□□□ 0.61
CCDC68Q9H2F9 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC68Q9H2F9 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC68Q9H2F9 AC026271.3-201ENST00000571884 352 ntBASIC18.84■□□□□ 0.61
CCDC68Q9H2F9 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.84■□□□□ 0.61
CCDC68Q9H2F9 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC68Q9H2F9 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CCDC68Q9H2F9 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC68Q9H2F9 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC68Q9H2F9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC68Q9H2F9 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CCDC68Q9H2F9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC68Q9H2F9 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CCDC68Q9H2F9 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC68Q9H2F9 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC68Q9H2F9 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC68Q9H2F9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.83■□□□□ 0.61
CCDC68Q9H2F9 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC68Q9H2F9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC68Q9H2F9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC68Q9H2F9 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC68Q9H2F9 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC68Q9H2F9 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC68Q9H2F9 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CCDC68Q9H2F9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CCDC68Q9H2F9 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC68Q9H2F9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC68Q9H2F9 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC68Q9H2F9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
CCDC68Q9H2F9 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC68Q9H2F9 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CCDC68Q9H2F9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC68Q9H2F9 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC68Q9H2F9 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC68Q9H2F9 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC68Q9H2F9 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC68Q9H2F9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC68Q9H2F9 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 RCC2P6-201ENST00000526625 1557 ntBASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 PRORSD1P-201ENST00000295112 541 ntBASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 KRT8P11-201ENST00000409686 1436 ntBASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC68Q9H2F9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC68Q9H2F9 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC68Q9H2F9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC68Q9H2F9 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC68Q9H2F9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC68Q9H2F9 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms