Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS11Q9H270 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VPS11Q9H270 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VPS11Q9H270 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.92■□□□□ 0.62
VPS11Q9H270 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS11Q9H270 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS11Q9H270 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS11Q9H270 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.91■□□□□ 0.62
VPS11Q9H270 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.91■□□□□ 0.62
VPS11Q9H270 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VPS11Q9H270 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.91■□□□□ 0.62
VPS11Q9H270 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS11Q9H270 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
VPS11Q9H270 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS11Q9H270 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS11Q9H270 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
VPS11Q9H270 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS11Q9H270 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS11Q9H270 UNC93B4-201ENST00000505679 747 ntBASIC18.91■□□□□ 0.62
VPS11Q9H270 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.91■□□□□ 0.62
VPS11Q9H270 PRKY-204ENST00000533551 1019 ntBASIC18.91■□□□□ 0.62
VPS11Q9H270 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.91■□□□□ 0.62
VPS11Q9H270 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.91■□□□□ 0.62
VPS11Q9H270 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS11Q9H270 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.91■□□□□ 0.62
VPS11Q9H270 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
VPS11Q9H270 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS11Q9H270 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VPS11Q9H270 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.91■□□□□ 0.62
VPS11Q9H270 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VPS11Q9H270 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
VPS11Q9H270 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.91■□□□□ 0.62
VPS11Q9H270 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.91■□□□□ 0.62
VPS11Q9H270 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS11Q9H270 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS11Q9H270 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS11Q9H270 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS11Q9H270 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
VPS11Q9H270 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS11Q9H270 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
VPS11Q9H270 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.91■□□□□ 0.62
VPS11Q9H270 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS11Q9H270 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VPS11Q9H270 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.91■□□□□ 0.62
VPS11Q9H270 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.91■□□□□ 0.62
VPS11Q9H270 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VPS11Q9H270 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS11Q9H270 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS11Q9H270 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS11Q9H270 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VPS11Q9H270 AC067852.2-201ENST00000590513 2313 ntBASIC18.9■□□□□ 0.62
VPS11Q9H270 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS11Q9H270 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS11Q9H270 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.9■□□□□ 0.62
VPS11Q9H270 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.9■□□□□ 0.62
VPS11Q9H270 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS11Q9H270 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS11Q9H270 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS11Q9H270 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
VPS11Q9H270 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS11Q9H270 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS11Q9H270 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
VPS11Q9H270 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.9■□□□□ 0.62
VPS11Q9H270 AC069152.1-201ENST00000438030 544 ntBASIC18.9■□□□□ 0.62
VPS11Q9H270 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS11Q9H270 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS11Q9H270 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS11Q9H270 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
VPS11Q9H270 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.9■□□□□ 0.62
VPS11Q9H270 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.9■□□□□ 0.62
VPS11Q9H270 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.9■□□□□ 0.62
VPS11Q9H270 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS11Q9H270 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VPS11Q9H270 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS11Q9H270 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS11Q9H270 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
VPS11Q9H270 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
VPS11Q9H270 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
VPS11Q9H270 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VPS11Q9H270 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.9■□□□□ 0.62
VPS11Q9H270 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
VPS11Q9H270 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS11Q9H270 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VPS11Q9H270 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.61
VPS11Q9H270 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS11Q9H270 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS11Q9H270 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
VPS11Q9H270 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.89■□□□□ 0.61
VPS11Q9H270 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VPS11Q9H270 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS11Q9H270 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VPS11Q9H270 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
VPS11Q9H270 TSPY21P-201ENST00000433481 731 ntBASIC18.89■□□□□ 0.61
VPS11Q9H270 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.89■□□□□ 0.61
VPS11Q9H270 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.89■□□□□ 0.61
VPS11Q9H270 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
VPS11Q9H270 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS11Q9H270 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VPS11Q9H270 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS11Q9H270 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms