Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 AC087289.5-201ENST00000586076 3175 ntBASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 AP000523.1-201ENST00000398242 1049 ntBASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 KRT18P56-201ENST00000507275 550 ntBASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 AL512353.2-201ENST00000448759 1962 ntBASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 AC005332.7-201ENST00000614046 2005 ntBASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 AL499627.1-201ENST00000569373 2188 ntBASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
KRTAP4-3Q9BYR4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 AC141586.3-201ENST00000562166 1838 ntBASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC6.37□□□□□ -1.39
KRTAP4-3Q9BYR4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms