Protein–RNA interactions for Protein: Q9BSG5

RTBDN, Retbindin, humanhuman

Predicted RBP Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTBDNQ9BSG5 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.57■□□□□ 0.08
RTBDNQ9BSG5 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC15.57■□□□□ 0.08
RTBDNQ9BSG5 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTBDNQ9BSG5 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTBDNQ9BSG5 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTBDNQ9BSG5 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.57■□□□□ 0.08
RTBDNQ9BSG5 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.57■□□□□ 0.08
RTBDNQ9BSG5 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTBDNQ9BSG5 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTBDNQ9BSG5 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.57■□□□□ 0.08
RTBDNQ9BSG5 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTBDNQ9BSG5 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RTBDNQ9BSG5 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RTBDNQ9BSG5 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RTBDNQ9BSG5 SIRPAP1-201ENST00000448467 1770 ntBASIC15.57■□□□□ 0.08
RTBDNQ9BSG5 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTBDNQ9BSG5 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.57■□□□□ 0.08
RTBDNQ9BSG5 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RTBDNQ9BSG5 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RTBDNQ9BSG5 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
RTBDNQ9BSG5 AC009053.2-201ENST00000563701 2365 ntBASIC15.56■□□□□ 0.08
RTBDNQ9BSG5 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
RTBDNQ9BSG5 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RTBDNQ9BSG5 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.56■□□□□ 0.08
RTBDNQ9BSG5 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RTBDNQ9BSG5 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RTBDNQ9BSG5 BX276092.2-201ENST00000417668 665 ntBASIC15.56■□□□□ 0.08
RTBDNQ9BSG5 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.56■□□□□ 0.08
RTBDNQ9BSG5 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.56■□□□□ 0.08
RTBDNQ9BSG5 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RTBDNQ9BSG5 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.56■□□□□ 0.08
RTBDNQ9BSG5 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC15.56■□□□□ 0.08
RTBDNQ9BSG5 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.56■□□□□ 0.08
RTBDNQ9BSG5 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.56■□□□□ 0.08
RTBDNQ9BSG5 MARS-234ENST00000630571 216 ntTSL 5 BASIC15.56■□□□□ 0.08
RTBDNQ9BSG5 MARS-235ENST00000630803 183 ntTSL 3 BASIC15.56■□□□□ 0.08
RTBDNQ9BSG5 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
RTBDNQ9BSG5 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RTBDNQ9BSG5 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RTBDNQ9BSG5 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RTBDNQ9BSG5 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RTBDNQ9BSG5 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RTBDNQ9BSG5 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
RTBDNQ9BSG5 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.56■□□□□ 0.08
RTBDNQ9BSG5 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RTBDNQ9BSG5 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.56■□□□□ 0.08
RTBDNQ9BSG5 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RTBDNQ9BSG5 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 OR2A1-AS1-201ENST00000462305 773 ntBASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 PHB2-213ENST00000546111 858 ntTSL 2 BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 AC087623.3-201ENST00000607047 1098 ntBASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 AC068587.9-201ENST00000641814 219 ntBASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 AC099398.1-201ENST00000567919 2776 ntBASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTBDNQ9BSG5 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RTBDNQ9BSG5 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.54■□□□□ 0.08
RTBDNQ9BSG5 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms