Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LITAFQ99732 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LITAFQ99732 AC027612.3-201ENST00000413684 1047 ntBASIC12.51□□□□□ -0.41
LITAFQ99732 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC12.51□□□□□ -0.41
LITAFQ99732 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC12.51□□□□□ -0.41
LITAFQ99732 C2orf69P4-201ENST00000565394 541 ntBASIC12.51□□□□□ -0.41
LITAFQ99732 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC12.51□□□□□ -0.41
LITAFQ99732 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
LITAFQ99732 TRIR-205ENST00000592273 783 ntTSL 3 BASIC12.51□□□□□ -0.41
LITAFQ99732 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LITAFQ99732 MYCNOS-205ENST00000641950 531 ntBASIC12.51□□□□□ -0.41
LITAFQ99732 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC12.51□□□□□ -0.41
LITAFQ99732 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LITAFQ99732 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
LITAFQ99732 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC12.51□□□□□ -0.41
LITAFQ99732 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LITAFQ99732 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC12.51□□□□□ -0.41
LITAFQ99732 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LITAFQ99732 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LITAFQ99732 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC12.51□□□□□ -0.41
LITAFQ99732 LTF-203ENST00000426532 2494 ntTSL 2 BASIC12.51□□□□□ -0.41
LITAFQ99732 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC12.51□□□□□ -0.41
LITAFQ99732 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LITAFQ99732 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC12.51□□□□□ -0.41
LITAFQ99732 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LITAFQ99732 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC12.51□□□□□ -0.41
LITAFQ99732 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
LITAFQ99732 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
LITAFQ99732 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LITAFQ99732 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LITAFQ99732 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LITAFQ99732 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LITAFQ99732 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LITAFQ99732 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LITAFQ99732 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LITAFQ99732 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
LITAFQ99732 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LITAFQ99732 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
LITAFQ99732 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LITAFQ99732 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LITAFQ99732 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
LITAFQ99732 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LITAFQ99732 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LITAFQ99732 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LITAFQ99732 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
LITAFQ99732 COX20-201ENST00000366528 568 ntTSL 2 BASIC12.5□□□□□ -0.41
LITAFQ99732 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LITAFQ99732 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LITAFQ99732 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LITAFQ99732 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
LITAFQ99732 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC12.5□□□□□ -0.41
LITAFQ99732 TERF1P2-201ENST00000583350 1212 ntBASIC12.5□□□□□ -0.41
LITAFQ99732 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
LITAFQ99732 AC004854.2-201ENST00000608450 1441 ntBASIC12.5□□□□□ -0.41
LITAFQ99732 MTMR9LP-203ENST00000426597 1545 ntBASIC12.5□□□□□ -0.41
LITAFQ99732 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC12.5□□□□□ -0.41
LITAFQ99732 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LITAFQ99732 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LITAFQ99732 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
LITAFQ99732 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LITAFQ99732 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LITAFQ99732 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
LITAFQ99732 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC12.5□□□□□ -0.41
LITAFQ99732 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
LITAFQ99732 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LITAFQ99732 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LITAFQ99732 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC12.5□□□□□ -0.41
LITAFQ99732 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LITAFQ99732 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LITAFQ99732 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LITAFQ99732 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC12.49□□□□□ -0.41
LITAFQ99732 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC12.49□□□□□ -0.41
LITAFQ99732 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LITAFQ99732 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LITAFQ99732 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LITAFQ99732 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC12.49□□□□□ -0.41
LITAFQ99732 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
LITAFQ99732 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC12.49□□□□□ -0.41
LITAFQ99732 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC12.49□□□□□ -0.41
LITAFQ99732 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LITAFQ99732 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LITAFQ99732 GOLGA6L3-201ENST00000507199 1679 ntBASIC12.49□□□□□ -0.41
LITAFQ99732 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LITAFQ99732 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LITAFQ99732 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
LITAFQ99732 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC12.49□□□□□ -0.41
LITAFQ99732 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC12.49□□□□□ -0.41
LITAFQ99732 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LITAFQ99732 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LITAFQ99732 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LITAFQ99732 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LITAFQ99732 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LITAFQ99732 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LITAFQ99732 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LITAFQ99732 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC12.49□□□□□ -0.41
LITAFQ99732 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LITAFQ99732 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
LITAFQ99732 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC12.49□□□□□ -0.41
LITAFQ99732 PBX2P1-201ENST00000493219 1291 ntBASIC12.49□□□□□ -0.41
LITAFQ99732 AC007322.4-201ENST00000509611 723 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms