Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC38A3Q99624 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC38A3Q99624 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC38A3Q99624 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC38A3Q99624 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC38A3Q99624 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
SLC38A3Q99624 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SLC38A3Q99624 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SLC38A3Q99624 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
SLC38A3Q99624 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.21■□□□□ 0.5
SLC38A3Q99624 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A3Q99624 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A3Q99624 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A3Q99624 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A3Q99624 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.2■□□□□ 0.5
SLC38A3Q99624 IER3-202ENST00000376377 1350 ntBASIC18.2■□□□□ 0.5
SLC38A3Q99624 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A3Q99624 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC38A3Q99624 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A3Q99624 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A3Q99624 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.2■□□□□ 0.5
SLC38A3Q99624 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A3Q99624 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.2■□□□□ 0.5
SLC38A3Q99624 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC38A3Q99624 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
SLC38A3Q99624 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
SLC38A3Q99624 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.2■□□□□ 0.5
SLC38A3Q99624 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC38A3Q99624 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A3Q99624 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A3Q99624 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A3Q99624 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A3Q99624 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A3Q99624 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC38A3Q99624 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A3Q99624 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A3Q99624 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC38A3Q99624 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC38A3Q99624 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SLC38A3Q99624 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC38A3Q99624 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SLC38A3Q99624 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
SLC38A3Q99624 AL512353.2-201ENST00000448759 1962 ntBASIC18.19■□□□□ 0.5
SLC38A3Q99624 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC38A3Q99624 AFG3L1P-217ENST00000557444 2447 ntBASIC18.19■□□□□ 0.5
SLC38A3Q99624 HCG11-201ENST00000411553 5696 ntBASIC18.19■□□□□ 0.5
SLC38A3Q99624 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC38A3Q99624 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC38A3Q99624 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SLC38A3Q99624 SPDYE15P-201ENST00000424157 909 ntBASIC18.19■□□□□ 0.5
SLC38A3Q99624 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC38A3Q99624 VENTXP5-201ENST00000523979 775 ntBASIC18.19■□□□□ 0.5
SLC38A3Q99624 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.19■□□□□ 0.5
SLC38A3Q99624 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC38A3Q99624 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC38A3Q99624 LINC01311-201ENST00000565162 1445 ntBASIC18.19■□□□□ 0.5
SLC38A3Q99624 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC38A3Q99624 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC38A3Q99624 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC38A3Q99624 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC38A3Q99624 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC38A3Q99624 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SLC38A3Q99624 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC38A3Q99624 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC38A3Q99624 IRX1P1-201ENST00000438849 1838 ntBASIC18.19■□□□□ 0.5
SLC38A3Q99624 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.19■□□□□ 0.5
SLC38A3Q99624 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A3Q99624 RCC2P3-201ENST00000418112 1537 ntBASIC18.18■□□□□ 0.5
SLC38A3Q99624 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A3Q99624 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC38A3Q99624 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A3Q99624 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC38A3Q99624 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A3Q99624 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A3Q99624 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.18■□□□□ 0.5
SLC38A3Q99624 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A3Q99624 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A3Q99624 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A3Q99624 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.18■□□□□ 0.5
SLC38A3Q99624 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A3Q99624 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.18■□□□□ 0.5
SLC38A3Q99624 ZNF444P1-201ENST00000559497 298 ntBASIC18.18■□□□□ 0.5
SLC38A3Q99624 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.18■□□□□ 0.5
SLC38A3Q99624 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.18■□□□□ 0.5
SLC38A3Q99624 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.18■□□□□ 0.5
SLC38A3Q99624 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC38A3Q99624 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A3Q99624 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC38A3Q99624 AC141586.3-201ENST00000562166 1838 ntBASIC18.18■□□□□ 0.5
SLC38A3Q99624 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A3Q99624 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A3Q99624 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A3Q99624 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A3Q99624 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
SLC38A3Q99624 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC38A3Q99624 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC38A3Q99624 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC38A3Q99624 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SLC38A3Q99624 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC38A3Q99624 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms