Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.52■□□□□ 0.08
S1PR3Q99500 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
S1PR3Q99500 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
S1PR3Q99500 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
S1PR3Q99500 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
S1PR3Q99500 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
S1PR3Q99500 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
S1PR3Q99500 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
S1PR3Q99500 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.52■□□□□ 0.07
S1PR3Q99500 AL031598.1-201ENST00000561511 1773 ntBASIC15.52■□□□□ 0.07
S1PR3Q99500 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.51■□□□□ 0.07
S1PR3Q99500 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
S1PR3Q99500 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
S1PR3Q99500 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
S1PR3Q99500 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
S1PR3Q99500 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
S1PR3Q99500 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
S1PR3Q99500 HTR7P1-201ENST00000538670 1336 ntBASIC15.51■□□□□ 0.07
S1PR3Q99500 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
S1PR3Q99500 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
S1PR3Q99500 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
S1PR3Q99500 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
S1PR3Q99500 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
S1PR3Q99500 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
S1PR3Q99500 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
S1PR3Q99500 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
S1PR3Q99500 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
S1PR3Q99500 TSPY23P-201ENST00000440136 739 ntBASIC15.51■□□□□ 0.07
S1PR3Q99500 KSR1P1-201ENST00000446298 240 ntBASIC15.51■□□□□ 0.07
S1PR3Q99500 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.51■□□□□ 0.07
S1PR3Q99500 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
S1PR3Q99500 AL353708.3-201ENST00000610272 989 ntBASIC15.51■□□□□ 0.07
S1PR3Q99500 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.51■□□□□ 0.07
S1PR3Q99500 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
S1PR3Q99500 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
S1PR3Q99500 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
S1PR3Q99500 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
S1PR3Q99500 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
S1PR3Q99500 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
S1PR3Q99500 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
S1PR3Q99500 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.51■□□□□ 0.07
S1PR3Q99500 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.51■□□□□ 0.07
S1PR3Q99500 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
S1PR3Q99500 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
S1PR3Q99500 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.51■□□□□ 0.07
S1PR3Q99500 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
S1PR3Q99500 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
S1PR3Q99500 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.5■□□□□ 0.07
S1PR3Q99500 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
S1PR3Q99500 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
S1PR3Q99500 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
S1PR3Q99500 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
S1PR3Q99500 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.5■□□□□ 0.07
S1PR3Q99500 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
S1PR3Q99500 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
S1PR3Q99500 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
S1PR3Q99500 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
S1PR3Q99500 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
S1PR3Q99500 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.5■□□□□ 0.07
S1PR3Q99500 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
S1PR3Q99500 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
S1PR3Q99500 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
S1PR3Q99500 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
S1PR3Q99500 PTPA-216ENST00000432651 857 ntTSL 2 BASIC15.5■□□□□ 0.07
S1PR3Q99500 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.5■□□□□ 0.07
S1PR3Q99500 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.5■□□□□ 0.07
S1PR3Q99500 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC15.5■□□□□ 0.07
S1PR3Q99500 RARRES2P10-201ENST00000564312 460 ntBASIC15.5■□□□□ 0.07
S1PR3Q99500 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.5■□□□□ 0.07
S1PR3Q99500 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
S1PR3Q99500 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
S1PR3Q99500 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
S1PR3Q99500 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
S1PR3Q99500 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.5■□□□□ 0.07
S1PR3Q99500 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
S1PR3Q99500 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.5■□□□□ 0.07
S1PR3Q99500 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
S1PR3Q99500 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
S1PR3Q99500 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
S1PR3Q99500 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
S1PR3Q99500 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
S1PR3Q99500 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
S1PR3Q99500 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
S1PR3Q99500 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
S1PR3Q99500 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
S1PR3Q99500 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.49■□□□□ 0.07
S1PR3Q99500 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
S1PR3Q99500 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
S1PR3Q99500 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
S1PR3Q99500 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
S1PR3Q99500 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.49■□□□□ 0.07
S1PR3Q99500 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
S1PR3Q99500 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
S1PR3Q99500 KRT8P41-201ENST00000533985 1514 ntBASIC15.49■□□□□ 0.07
S1PR3Q99500 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
S1PR3Q99500 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.49■□□□□ 0.07
S1PR3Q99500 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.49■□□□□ 0.07
S1PR3Q99500 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
S1PR3Q99500 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
S1PR3Q99500 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms