Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDK5RAP1Q96SZ6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDK5RAP1Q96SZ6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
CDK5RAP1Q96SZ6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDK5RAP1Q96SZ6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CDK5RAP1Q96SZ6 AL161938.1-201ENST00000569833 2180 ntBASIC19.49■□□□□ 0.71
CDK5RAP1Q96SZ6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDK5RAP1Q96SZ6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.49■□□□□ 0.71
CDK5RAP1Q96SZ6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.49■□□□□ 0.71
CDK5RAP1Q96SZ6 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.49■□□□□ 0.71
CDK5RAP1Q96SZ6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CDK5RAP1Q96SZ6 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.49■□□□□ 0.71
CDK5RAP1Q96SZ6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.49■□□□□ 0.71
CDK5RAP1Q96SZ6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CDK5RAP1Q96SZ6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CDK5RAP1Q96SZ6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CDK5RAP1Q96SZ6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDK5RAP1Q96SZ6 AC034236.2-201ENST00000606662 1610 ntBASIC19.49■□□□□ 0.71
CDK5RAP1Q96SZ6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDK5RAP1Q96SZ6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.49■□□□□ 0.71
CDK5RAP1Q96SZ6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.49■□□□□ 0.71
CDK5RAP1Q96SZ6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.49■□□□□ 0.71
CDK5RAP1Q96SZ6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDK5RAP1Q96SZ6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CDK5RAP1Q96SZ6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDK5RAP1Q96SZ6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
CDK5RAP1Q96SZ6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDK5RAP1Q96SZ6 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDK5RAP1Q96SZ6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.48■□□□□ 0.71
CDK5RAP1Q96SZ6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDK5RAP1Q96SZ6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDK5RAP1Q96SZ6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDK5RAP1Q96SZ6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDK5RAP1Q96SZ6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDK5RAP1Q96SZ6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.48■□□□□ 0.71
CDK5RAP1Q96SZ6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDK5RAP1Q96SZ6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.48■□□□□ 0.71
CDK5RAP1Q96SZ6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDK5RAP1Q96SZ6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.48■□□□□ 0.71
CDK5RAP1Q96SZ6 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.48■□□□□ 0.71
CDK5RAP1Q96SZ6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CDK5RAP1Q96SZ6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.48■□□□□ 0.71
CDK5RAP1Q96SZ6 MYC-208ENST00000641036 567 ntBASIC19.48■□□□□ 0.71
CDK5RAP1Q96SZ6 AC083906.6-201ENST00000641366 219 ntBASIC19.48■□□□□ 0.71
CDK5RAP1Q96SZ6 HEIH-201ENST00000623091 1652 ntBASIC19.48■□□□□ 0.71
CDK5RAP1Q96SZ6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDK5RAP1Q96SZ6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDK5RAP1Q96SZ6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.48■□□□□ 0.71
CDK5RAP1Q96SZ6 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDK5RAP1Q96SZ6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.48■□□□□ 0.71
CDK5RAP1Q96SZ6 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDK5RAP1Q96SZ6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDK5RAP1Q96SZ6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDK5RAP1Q96SZ6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDK5RAP1Q96SZ6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
CDK5RAP1Q96SZ6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK5RAP1Q96SZ6 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK5RAP1Q96SZ6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK5RAP1Q96SZ6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.47■□□□□ 0.71
CDK5RAP1Q96SZ6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.47■□□□□ 0.71
CDK5RAP1Q96SZ6 KRT18P23-201ENST00000435622 1283 ntBASIC19.47■□□□□ 0.71
CDK5RAP1Q96SZ6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDK5RAP1Q96SZ6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDK5RAP1Q96SZ6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
CDK5RAP1Q96SZ6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.47■□□□□ 0.71
CDK5RAP1Q96SZ6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.47■□□□□ 0.71
CDK5RAP1Q96SZ6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.47■□□□□ 0.71
CDK5RAP1Q96SZ6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
CDK5RAP1Q96SZ6 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK5RAP1Q96SZ6 AC116562.4-201ENST00000641316 2276 ntBASIC19.47■□□□□ 0.71
CDK5RAP1Q96SZ6 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.47■□□□□ 0.71
CDK5RAP1Q96SZ6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CDK5RAP1Q96SZ6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDK5RAP1Q96SZ6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.47■□□□□ 0.71
CDK5RAP1Q96SZ6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK5RAP1Q96SZ6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK5RAP1Q96SZ6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CDK5RAP1Q96SZ6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CDK5RAP1Q96SZ6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.47■□□□□ 0.71
CDK5RAP1Q96SZ6 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDK5RAP1Q96SZ6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK5RAP1Q96SZ6 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.46■□□□□ 0.71
CDK5RAP1Q96SZ6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CDK5RAP1Q96SZ6 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CDK5RAP1Q96SZ6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDK5RAP1Q96SZ6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.46■□□□□ 0.71
CDK5RAP1Q96SZ6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CDK5RAP1Q96SZ6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.46■□□□□ 0.71
CDK5RAP1Q96SZ6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDK5RAP1Q96SZ6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDK5RAP1Q96SZ6 AL359075.1-203ENST00000462729 1002 ntBASIC19.46■□□□□ 0.71
CDK5RAP1Q96SZ6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.46■□□□□ 0.71
CDK5RAP1Q96SZ6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDK5RAP1Q96SZ6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDK5RAP1Q96SZ6 AC024243.1-201ENST00000609234 778 ntBASIC19.46■□□□□ 0.71
CDK5RAP1Q96SZ6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.46■□□□□ 0.71
CDK5RAP1Q96SZ6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CDK5RAP1Q96SZ6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDK5RAP1Q96SZ6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.46■□□□□ 0.71
CDK5RAP1Q96SZ6 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms