Protein–RNA interactions for Protein: Q96P50

ACAP3, Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3Q96P50 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.36■□□□□ 0.85
ACAP3Q96P50 HOMER2P1-201ENST00000455653 964 ntBASIC20.36■□□□□ 0.85
ACAP3Q96P50 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
ACAP3Q96P50 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ACAP3Q96P50 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ACAP3Q96P50 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.36■□□□□ 0.85
ACAP3Q96P50 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.36■□□□□ 0.85
ACAP3Q96P50 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
ACAP3Q96P50 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ACAP3Q96P50 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ACAP3Q96P50 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ACAP3Q96P50 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ACAP3Q96P50 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.35■□□□□ 0.85
ACAP3Q96P50 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
ACAP3Q96P50 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ACAP3Q96P50 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.35■□□□□ 0.85
ACAP3Q96P50 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ACAP3Q96P50 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ACAP3Q96P50 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.35■□□□□ 0.85
ACAP3Q96P50 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.35■□□□□ 0.85
ACAP3Q96P50 GCSHP2-201ENST00000560971 527 ntBASIC20.35■□□□□ 0.85
ACAP3Q96P50 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.35■□□□□ 0.85
ACAP3Q96P50 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ACAP3Q96P50 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
ACAP3Q96P50 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ACAP3Q96P50 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ACAP3Q96P50 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
ACAP3Q96P50 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ACAP3Q96P50 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.35■□□□□ 0.85
ACAP3Q96P50 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ACAP3Q96P50 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
ACAP3Q96P50 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ACAP3Q96P50 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.34■□□□□ 0.85
ACAP3Q96P50 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ACAP3Q96P50 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ACAP3Q96P50 AC087289.5-201ENST00000586076 3175 ntBASIC20.34■□□□□ 0.85
ACAP3Q96P50 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ACAP3Q96P50 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ACAP3Q96P50 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ACAP3Q96P50 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ACAP3Q96P50 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ACAP3Q96P50 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ACAP3Q96P50 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ACAP3Q96P50 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ACAP3Q96P50 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ACAP3Q96P50 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ACAP3Q96P50 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.34■□□□□ 0.85
ACAP3Q96P50 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.34■□□□□ 0.85
ACAP3Q96P50 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ACAP3Q96P50 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.34■□□□□ 0.85
ACAP3Q96P50 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.34■□□□□ 0.85
ACAP3Q96P50 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.34■□□□□ 0.85
ACAP3Q96P50 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
ACAP3Q96P50 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ACAP3Q96P50 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.34■□□□□ 0.85
ACAP3Q96P50 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ACAP3Q96P50 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ACAP3Q96P50 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ACAP3Q96P50 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ACAP3Q96P50 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ACAP3Q96P50 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
ACAP3Q96P50 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ACAP3Q96P50 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ACAP3Q96P50 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
ACAP3Q96P50 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ACAP3Q96P50 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.85
ACAP3Q96P50 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.33■□□□□ 0.85
ACAP3Q96P50 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ACAP3Q96P50 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ACAP3Q96P50 AL049812.1-201ENST00000432563 2267 ntBASIC20.33■□□□□ 0.85
ACAP3Q96P50 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
ACAP3Q96P50 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.33■□□□□ 0.85
ACAP3Q96P50 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ACAP3Q96P50 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.33■□□□□ 0.85
ACAP3Q96P50 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ACAP3Q96P50 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.33■□□□□ 0.85
ACAP3Q96P50 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ACAP3Q96P50 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.33■□□□□ 0.85
ACAP3Q96P50 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.33■□□□□ 0.85
ACAP3Q96P50 AC087388.1-201ENST00000571370 1112 ntBASIC20.33■□□□□ 0.85
ACAP3Q96P50 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.33■□□□□ 0.85
ACAP3Q96P50 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.33■□□□□ 0.85
ACAP3Q96P50 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.33■□□□□ 0.85
ACAP3Q96P50 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.85
ACAP3Q96P50 AC068587.9-201ENST00000641814 219 ntBASIC20.33■□□□□ 0.85
ACAP3Q96P50 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.33■□□□□ 0.84
ACAP3Q96P50 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ACAP3Q96P50 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ACAP3Q96P50 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.33■□□□□ 0.84
ACAP3Q96P50 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ACAP3Q96P50 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.33■□□□□ 0.84
ACAP3Q96P50 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.32■□□□□ 0.84
ACAP3Q96P50 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ACAP3Q96P50 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ACAP3Q96P50 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
ACAP3Q96P50 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
ACAP3Q96P50 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.32■□□□□ 0.84
ACAP3Q96P50 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ACAP3Q96P50 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ACAP3Q96P50 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms