Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 BX664615.1-201ENST00000443558 458 ntBASIC19.35■□□□□ 0.69
RPRD1AQ96P16 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 AL109659.2-201ENST00000606809 1674 ntBASIC19.35■□□□□ 0.69
RPRD1AQ96P16 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 AC008556.1-201ENST00000610908 2040 ntBASIC19.35■□□□□ 0.69
RPRD1AQ96P16 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPRD1AQ96P16 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPRD1AQ96P16 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.34■□□□□ 0.69
RPRD1AQ96P16 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RPRD1AQ96P16 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RPRD1AQ96P16 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.34■□□□□ 0.69
RPRD1AQ96P16 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPRD1AQ96P16 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPRD1AQ96P16 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPRD1AQ96P16 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPRD1AQ96P16 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPRD1AQ96P16 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPRD1AQ96P16 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPRD1AQ96P16 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.34■□□□□ 0.69
RPRD1AQ96P16 AC009947.2-201ENST00000444014 672 ntBASIC19.34■□□□□ 0.69
RPRD1AQ96P16 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.34■□□□□ 0.69
RPRD1AQ96P16 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.34■□□□□ 0.69
RPRD1AQ96P16 WWOX-216ENST00000569818 525 ntBASIC19.34■□□□□ 0.69
RPRD1AQ96P16 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPRD1AQ96P16 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPRD1AQ96P16 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPRD1AQ96P16 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPRD1AQ96P16 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.34■□□□□ 0.69
RPRD1AQ96P16 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPRD1AQ96P16 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPRD1AQ96P16 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPRD1AQ96P16 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPRD1AQ96P16 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPRD1AQ96P16 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
RPRD1AQ96P16 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RPRD1AQ96P16 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.33■□□□□ 0.69
RPRD1AQ96P16 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RPRD1AQ96P16 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RPRD1AQ96P16 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
RPRD1AQ96P16 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RPRD1AQ96P16 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RPRD1AQ96P16 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
RPRD1AQ96P16 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RPRD1AQ96P16 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.33■□□□□ 0.69
RPRD1AQ96P16 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RPRD1AQ96P16 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPRD1AQ96P16 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.33■□□□□ 0.68
RPRD1AQ96P16 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.33■□□□□ 0.68
RPRD1AQ96P16 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.33■□□□□ 0.68
RPRD1AQ96P16 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPRD1AQ96P16 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.33■□□□□ 0.68
RPRD1AQ96P16 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.33■□□□□ 0.68
RPRD1AQ96P16 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPRD1AQ96P16 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPRD1AQ96P16 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.33■□□□□ 0.68
RPRD1AQ96P16 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPRD1AQ96P16 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.33■□□□□ 0.68
RPRD1AQ96P16 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPRD1AQ96P16 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.33■□□□□ 0.68
RPRD1AQ96P16 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPRD1AQ96P16 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
RPRD1AQ96P16 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.33■□□□□ 0.68
RPRD1AQ96P16 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RPRD1AQ96P16 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.33■□□□□ 0.68
RPRD1AQ96P16 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
RPRD1AQ96P16 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RPRD1AQ96P16 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.33■□□□□ 0.68
RPRD1AQ96P16 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RPRD1AQ96P16 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPRD1AQ96P16 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPRD1AQ96P16 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RPRD1AQ96P16 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPRD1AQ96P16 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.32■□□□□ 0.68
RPRD1AQ96P16 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPRD1AQ96P16 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPRD1AQ96P16 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPRD1AQ96P16 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPRD1AQ96P16 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RPRD1AQ96P16 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RPRD1AQ96P16 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.32■□□□□ 0.68
RPRD1AQ96P16 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms