Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.34■□□□□ 0.69
IFT43Q96FT9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
IFT43Q96FT9 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.34■□□□□ 0.69
IFT43Q96FT9 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
IFT43Q96FT9 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.34■□□□□ 0.69
IFT43Q96FT9 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
IFT43Q96FT9 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
IFT43Q96FT9 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
IFT43Q96FT9 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.34■□□□□ 0.69
IFT43Q96FT9 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.34■□□□□ 0.69
IFT43Q96FT9 AC004951.3-201ENST00000418645 1148 ntBASIC19.34■□□□□ 0.69
IFT43Q96FT9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.34■□□□□ 0.69
IFT43Q96FT9 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
IFT43Q96FT9 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.34■□□□□ 0.69
IFT43Q96FT9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.34■□□□□ 0.69
IFT43Q96FT9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.34■□□□□ 0.69
IFT43Q96FT9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
IFT43Q96FT9 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.34■□□□□ 0.69
IFT43Q96FT9 DGCR10-201ENST00000609839 495 ntBASIC19.34■□□□□ 0.69
IFT43Q96FT9 MIR6786-201ENST00000616843 113 ntBASIC19.34■□□□□ 0.69
IFT43Q96FT9 AC005363.2-201ENST00000618631 242 ntBASIC19.34■□□□□ 0.69
IFT43Q96FT9 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
IFT43Q96FT9 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
IFT43Q96FT9 AC092865.7-201ENST00000641832 219 ntBASIC19.34■□□□□ 0.69
IFT43Q96FT9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
IFT43Q96FT9 RCC2P6-201ENST00000526625 1557 ntBASIC19.34■□□□□ 0.69
IFT43Q96FT9 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
IFT43Q96FT9 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
IFT43Q96FT9 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
IFT43Q96FT9 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
IFT43Q96FT9 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
IFT43Q96FT9 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
IFT43Q96FT9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
IFT43Q96FT9 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
IFT43Q96FT9 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IFT43Q96FT9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.33■□□□□ 0.68
IFT43Q96FT9 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.33■□□□□ 0.68
IFT43Q96FT9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.33■□□□□ 0.68
IFT43Q96FT9 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IFT43Q96FT9 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
IFT43Q96FT9 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
IFT43Q96FT9 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
IFT43Q96FT9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.33■□□□□ 0.68
IFT43Q96FT9 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IFT43Q96FT9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IFT43Q96FT9 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.33■□□□□ 0.68
IFT43Q96FT9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
IFT43Q96FT9 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
IFT43Q96FT9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
IFT43Q96FT9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.33■□□□□ 0.68
IFT43Q96FT9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
IFT43Q96FT9 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.32■□□□□ 0.68
IFT43Q96FT9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IFT43Q96FT9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.32■□□□□ 0.68
IFT43Q96FT9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IFT43Q96FT9 KRT18P22-201ENST00000402024 1347 ntBASIC19.32■□□□□ 0.68
IFT43Q96FT9 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
IFT43Q96FT9 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IFT43Q96FT9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IFT43Q96FT9 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
IFT43Q96FT9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
IFT43Q96FT9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
IFT43Q96FT9 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IFT43Q96FT9 TMPOP1-202ENST00000424642 1267 ntBASIC19.32■□□□□ 0.68
IFT43Q96FT9 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.32■□□□□ 0.68
IFT43Q96FT9 AC011298.2-201ENST00000617989 482 ntBASIC19.32■□□□□ 0.68
IFT43Q96FT9 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IFT43Q96FT9 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
IFT43Q96FT9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.32■□□□□ 0.68
IFT43Q96FT9 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
IFT43Q96FT9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IFT43Q96FT9 KRT8P9-201ENST00000558927 1449 ntBASIC19.32■□□□□ 0.68
IFT43Q96FT9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
IFT43Q96FT9 BCL2-203ENST00000589955 5011 ntBASIC19.32■□□□□ 0.68
IFT43Q96FT9 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
IFT43Q96FT9 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IFT43Q96FT9 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
IFT43Q96FT9 AL161938.1-201ENST00000569833 2180 ntBASIC19.32■□□□□ 0.68
IFT43Q96FT9 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.32■□□□□ 0.68
IFT43Q96FT9 LINC01568-207ENST00000641790 1380 ntBASIC19.32■□□□□ 0.68
IFT43Q96FT9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFT43Q96FT9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFT43Q96FT9 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
IFT43Q96FT9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
IFT43Q96FT9 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
IFT43Q96FT9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
IFT43Q96FT9 IRX1P1-201ENST00000438849 1838 ntBASIC19.31■□□□□ 0.68
IFT43Q96FT9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFT43Q96FT9 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFT43Q96FT9 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.31■□□□□ 0.68
IFT43Q96FT9 TSPY23P-201ENST00000440136 739 ntBASIC19.31■□□□□ 0.68
IFT43Q96FT9 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFT43Q96FT9 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.31■□□□□ 0.68
IFT43Q96FT9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.31■□□□□ 0.68
IFT43Q96FT9 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.31■□□□□ 0.68
IFT43Q96FT9 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.31■□□□□ 0.68
IFT43Q96FT9 AP005242.2-201ENST00000580065 1175 ntBASIC19.31■□□□□ 0.68
IFT43Q96FT9 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
IFT43Q96FT9 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.31■□□□□ 0.68
IFT43Q96FT9 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms