Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM11Q96F44 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.87■□□□□ 0.77
TRIM11Q96F44 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM11Q96F44 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM11Q96F44 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM11Q96F44 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM11Q96F44 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM11Q96F44 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
TRIM11Q96F44 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM11Q96F44 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TRIM11Q96F44 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TRIM11Q96F44 FAM197Y1-201ENST00000421178 764 ntBASIC19.87■□□□□ 0.77
TRIM11Q96F44 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM11Q96F44 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM11Q96F44 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
TRIM11Q96F44 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.87■□□□□ 0.77
TRIM11Q96F44 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.87■□□□□ 0.77
TRIM11Q96F44 CD177P1-201ENST00000606252 935 ntBASIC19.87■□□□□ 0.77
TRIM11Q96F44 DGCR10-201ENST00000609839 495 ntBASIC19.87■□□□□ 0.77
TRIM11Q96F44 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM11Q96F44 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM11Q96F44 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TRIM11Q96F44 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM11Q96F44 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM11Q96F44 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM11Q96F44 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.86■□□□□ 0.77
TRIM11Q96F44 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TRIM11Q96F44 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM11Q96F44 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TRIM11Q96F44 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM11Q96F44 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM11Q96F44 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM11Q96F44 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM11Q96F44 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.86■□□□□ 0.77
TRIM11Q96F44 AC104581.1-202ENST00000635932 2618 ntBASIC19.86■□□□□ 0.77
TRIM11Q96F44 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM11Q96F44 PRORSD1P-201ENST00000295112 541 ntBASIC19.86■□□□□ 0.77
TRIM11Q96F44 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM11Q96F44 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM11Q96F44 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.86■□□□□ 0.77
TRIM11Q96F44 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TRIM11Q96F44 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.86■□□□□ 0.77
TRIM11Q96F44 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.86■□□□□ 0.77
TRIM11Q96F44 AC142381.4-202ENST00000563973 229 ntBASIC19.86■□□□□ 0.77
TRIM11Q96F44 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM11Q96F44 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.86■□□□□ 0.77
TRIM11Q96F44 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.86■□□□□ 0.77
TRIM11Q96F44 AP001412.1-201ENST00000608405 714 ntBASIC19.86■□□□□ 0.77
TRIM11Q96F44 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TRIM11Q96F44 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.86■□□□□ 0.77
TRIM11Q96F44 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM11Q96F44 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM11Q96F44 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.86■□□□□ 0.77
TRIM11Q96F44 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TRIM11Q96F44 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM11Q96F44 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM11Q96F44 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM11Q96F44 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM11Q96F44 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM11Q96F44 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TRIM11Q96F44 NEFHP1-201ENST00000412845 2629 ntBASIC19.86■□□□□ 0.77
TRIM11Q96F44 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
TRIM11Q96F44 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM11Q96F44 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM11Q96F44 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM11Q96F44 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM11Q96F44 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM11Q96F44 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TRIM11Q96F44 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM11Q96F44 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TRIM11Q96F44 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
TRIM11Q96F44 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM11Q96F44 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM11Q96F44 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM11Q96F44 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM11Q96F44 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM11Q96F44 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM11Q96F44 MESTP1-201ENST00000404287 994 ntBASIC19.85■□□□□ 0.77
TRIM11Q96F44 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM11Q96F44 UBE2SP1-201ENST00000450587 669 ntBASIC19.85■□□□□ 0.77
TRIM11Q96F44 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.85■□□□□ 0.77
TRIM11Q96F44 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.85■□□□□ 0.77
TRIM11Q96F44 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.85■□□□□ 0.77
TRIM11Q96F44 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM11Q96F44 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM11Q96F44 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM11Q96F44 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
TRIM11Q96F44 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
TRIM11Q96F44 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TRIM11Q96F44 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM11Q96F44 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM11Q96F44 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM11Q96F44 AC112777.1-201ENST00000540175 1423 ntBASIC19.85■□□□□ 0.77
TRIM11Q96F44 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM11Q96F44 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TRIM11Q96F44 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM11Q96F44 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM11Q96F44 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM11Q96F44 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM11Q96F44 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms