Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CTHRC1Q96CG8 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.4■□□□□ 0.38
CTHRC1Q96CG8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.4■□□□□ 0.38
CTHRC1Q96CG8 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CTHRC1Q96CG8 AL499627.1-201ENST00000569373 2188 ntBASIC17.4■□□□□ 0.38
CTHRC1Q96CG8 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.4■□□□□ 0.38
CTHRC1Q96CG8 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CTHRC1Q96CG8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTHRC1Q96CG8 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTHRC1Q96CG8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTHRC1Q96CG8 AC036111.1-201ENST00000533973 1582 ntBASIC17.4■□□□□ 0.38
CTHRC1Q96CG8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.4■□□□□ 0.38
CTHRC1Q96CG8 WIZP1-201ENST00000531444 2299 ntBASIC17.4■□□□□ 0.38
CTHRC1Q96CG8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTHRC1Q96CG8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.4■□□□□ 0.38
CTHRC1Q96CG8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTHRC1Q96CG8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
CTHRC1Q96CG8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CTHRC1Q96CG8 AC112777.1-201ENST00000540175 1423 ntBASIC17.39■□□□□ 0.38
CTHRC1Q96CG8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTHRC1Q96CG8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CTHRC1Q96CG8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTHRC1Q96CG8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.39■□□□□ 0.37
CTHRC1Q96CG8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTHRC1Q96CG8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTHRC1Q96CG8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CTHRC1Q96CG8 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTHRC1Q96CG8 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.39■□□□□ 0.37
CTHRC1Q96CG8 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTHRC1Q96CG8 ECEL1P3-201ENST00000427961 737 ntBASIC17.39■□□□□ 0.37
CTHRC1Q96CG8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.39■□□□□ 0.37
CTHRC1Q96CG8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.39■□□□□ 0.37
CTHRC1Q96CG8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTHRC1Q96CG8 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTHRC1Q96CG8 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.39■□□□□ 0.37
CTHRC1Q96CG8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTHRC1Q96CG8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.39■□□□□ 0.37
CTHRC1Q96CG8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.39■□□□□ 0.37
CTHRC1Q96CG8 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CTHRC1Q96CG8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.39■□□□□ 0.37
CTHRC1Q96CG8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTHRC1Q96CG8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTHRC1Q96CG8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.39■□□□□ 0.37
CTHRC1Q96CG8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTHRC1Q96CG8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.39■□□□□ 0.37
CTHRC1Q96CG8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CTHRC1Q96CG8 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTHRC1Q96CG8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.38■□□□□ 0.37
CTHRC1Q96CG8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTHRC1Q96CG8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CTHRC1Q96CG8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTHRC1Q96CG8 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
CTHRC1Q96CG8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.38■□□□□ 0.37
CTHRC1Q96CG8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTHRC1Q96CG8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTHRC1Q96CG8 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.38■□□□□ 0.37
CTHRC1Q96CG8 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.38■□□□□ 0.37
CTHRC1Q96CG8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.38■□□□□ 0.37
CTHRC1Q96CG8 LINC01023-201ENST00000606054 436 ntBASIC17.38■□□□□ 0.37
CTHRC1Q96CG8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTHRC1Q96CG8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.38■□□□□ 0.37
CTHRC1Q96CG8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTHRC1Q96CG8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CTHRC1Q96CG8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTHRC1Q96CG8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTHRC1Q96CG8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CTHRC1Q96CG8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTHRC1Q96CG8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTHRC1Q96CG8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTHRC1Q96CG8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTHRC1Q96CG8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTHRC1Q96CG8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CTHRC1Q96CG8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.38■□□□□ 0.37
CTHRC1Q96CG8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTHRC1Q96CG8 HOXB1-202ENST00000577092 1414 ntBASIC17.38■□□□□ 0.37
CTHRC1Q96CG8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTHRC1Q96CG8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.37■□□□□ 0.37
CTHRC1Q96CG8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.37■□□□□ 0.37
CTHRC1Q96CG8 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTHRC1Q96CG8 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.37■□□□□ 0.37
CTHRC1Q96CG8 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTHRC1Q96CG8 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.37■□□□□ 0.37
CTHRC1Q96CG8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTHRC1Q96CG8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.37■□□□□ 0.37
CTHRC1Q96CG8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTHRC1Q96CG8 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTHRC1Q96CG8 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.37■□□□□ 0.37
CTHRC1Q96CG8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.37■□□□□ 0.37
CTHRC1Q96CG8 AL512604.3-201ENST00000569583 964 ntBASIC17.37■□□□□ 0.37
CTHRC1Q96CG8 AC133561.5-201ENST00000635547 218 ntBASIC17.37■□□□□ 0.37
CTHRC1Q96CG8 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CTHRC1Q96CG8 MYC-208ENST00000641036 567 ntBASIC17.37■□□□□ 0.37
CTHRC1Q96CG8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTHRC1Q96CG8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.37■□□□□ 0.37
CTHRC1Q96CG8 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTHRC1Q96CG8 KRT8P7-201ENST00000533003 1432 ntBASIC17.37■□□□□ 0.37
CTHRC1Q96CG8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.37■□□□□ 0.37
CTHRC1Q96CG8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTHRC1Q96CG8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTHRC1Q96CG8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms