Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 ABALON-201ENST00000629058 1903 ntBASIC18.06■□□□□ 0.48
VPS33AQ96AX1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 MIR935-201ENST00000401179 91 ntBASIC18.06■□□□□ 0.48
VPS33AQ96AX1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS33AQ96AX1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.05■□□□□ 0.48
VPS33AQ96AX1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.05■□□□□ 0.48
VPS33AQ96AX1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VPS33AQ96AX1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS33AQ96AX1 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VPS33AQ96AX1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.05■□□□□ 0.48
VPS33AQ96AX1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS33AQ96AX1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS33AQ96AX1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS33AQ96AX1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS33AQ96AX1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS33AQ96AX1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.05■□□□□ 0.48
VPS33AQ96AX1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.05■□□□□ 0.48
VPS33AQ96AX1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.05■□□□□ 0.48
VPS33AQ96AX1 AL160286.2-201ENST00000567150 934 ntBASIC18.05■□□□□ 0.48
VPS33AQ96AX1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.05■□□□□ 0.48
VPS33AQ96AX1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
VPS33AQ96AX1 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS33AQ96AX1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
VPS33AQ96AX1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VPS33AQ96AX1 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS33AQ96AX1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.05■□□□□ 0.48
VPS33AQ96AX1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.05■□□□□ 0.48
VPS33AQ96AX1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS33AQ96AX1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS33AQ96AX1 AC073592.3-201ENST00000625118 1834 ntBASIC18.05■□□□□ 0.48
VPS33AQ96AX1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS33AQ96AX1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
VPS33AQ96AX1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.04■□□□□ 0.48
VPS33AQ96AX1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.04■□□□□ 0.48
VPS33AQ96AX1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS33AQ96AX1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS33AQ96AX1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
VPS33AQ96AX1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.04■□□□□ 0.48
VPS33AQ96AX1 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS33AQ96AX1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS33AQ96AX1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS33AQ96AX1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.04■□□□□ 0.48
VPS33AQ96AX1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VPS33AQ96AX1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
VPS33AQ96AX1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.04■□□□□ 0.48
VPS33AQ96AX1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.04■□□□□ 0.48
VPS33AQ96AX1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms