Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF34Q969K3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF34Q969K3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RNF34Q969K3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.65■□□□□ 0.74
RNF34Q969K3 ECEL1P3-201ENST00000427961 737 ntBASIC19.65■□□□□ 0.74
RNF34Q969K3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF34Q969K3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF34Q969K3 ECEL1P2-202ENST00000465689 757 ntBASIC19.65■□□□□ 0.74
RNF34Q969K3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.65■□□□□ 0.74
RNF34Q969K3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.65■□□□□ 0.74
RNF34Q969K3 AL353719.1-201ENST00000566847 864 ntBASIC19.65■□□□□ 0.74
RNF34Q969K3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RNF34Q969K3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF34Q969K3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF34Q969K3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RNF34Q969K3 KRT8P3-201ENST00000519669 1449 ntBASIC19.65■□□□□ 0.74
RNF34Q969K3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
RNF34Q969K3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
RNF34Q969K3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF34Q969K3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
RNF34Q969K3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF34Q969K3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF34Q969K3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF34Q969K3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
RNF34Q969K3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF34Q969K3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF34Q969K3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.64■□□□□ 0.74
RNF34Q969K3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF34Q969K3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.64■□□□□ 0.74
RNF34Q969K3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF34Q969K3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF34Q969K3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF34Q969K3 INGX-201ENST00000359239 846 ntBASIC19.64■□□□□ 0.73
RNF34Q969K3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF34Q969K3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF34Q969K3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RNF34Q969K3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF34Q969K3 AC145285.6-201ENST00000604632 637 ntBASIC19.64■□□□□ 0.73
RNF34Q969K3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
RNF34Q969K3 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.64■□□□□ 0.73
RNF34Q969K3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
RNF34Q969K3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF34Q969K3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF34Q969K3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF34Q969K3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF34Q969K3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
RNF34Q969K3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF34Q969K3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF34Q969K3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RNF34Q969K3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF34Q969K3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF34Q969K3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF34Q969K3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF34Q969K3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF34Q969K3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF34Q969K3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF34Q969K3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF34Q969K3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF34Q969K3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF34Q969K3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF34Q969K3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF34Q969K3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF34Q969K3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF34Q969K3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF34Q969K3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
RNF34Q969K3 AC007663.1-201ENST00000438948 1240 ntBASIC19.63■□□□□ 0.73
RNF34Q969K3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF34Q969K3 AP003041.3-201ENST00000527151 707 ntBASIC19.63■□□□□ 0.73
RNF34Q969K3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.63■□□□□ 0.73
RNF34Q969K3 AL023803.3-201ENST00000615559 522 ntBASIC19.63■□□□□ 0.73
RNF34Q969K3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF34Q969K3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RNF34Q969K3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF34Q969K3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF34Q969K3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF34Q969K3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF34Q969K3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF34Q969K3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RNF34Q969K3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF34Q969K3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
RNF34Q969K3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF34Q969K3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF34Q969K3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF34Q969K3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF34Q969K3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF34Q969K3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF34Q969K3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RNF34Q969K3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF34Q969K3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF34Q969K3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF34Q969K3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RNF34Q969K3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF34Q969K3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RNF34Q969K3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.62■□□□□ 0.73
RNF34Q969K3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.62■□□□□ 0.73
RNF34Q969K3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
RNF34Q969K3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF34Q969K3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF34Q969K3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF34Q969K3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms